RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SAP30O75446 220 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 KBTBD11O94819 623 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 TBX18O95935 607 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 CD4P01730 458 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 PIGRP01833 764 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 ALOX5P09917 674 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 ODC1P11926 461 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 C4BPBP20851 252 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 FASP25445 335 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 TM4SF1P30408 202 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 ZNF75DP51815 510 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 RASGEF1BQ0VAM2 473 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 HSPB3Q12988 150 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 RAB41Q5JT25 222 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 KRT79Q5XKE5 535 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 IL17RELQ6ZVW7 336 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 MCM10Q7L590 875 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 NAXDQ8IW45 347 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 GUF1Q8N442 669 aaKnown RBP1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 ROBO4Q8WZ75 1007 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 NXPE2Q96DL1 559 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 CTRCQ99895 268 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 SLC2A11Q9BYW1 496 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 WDR41Q9HAD4 459 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 OLA1Q9NTK5 396 aaKnown RBP1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 C9orf78Q9NZ63 289 aaPredicted RBP1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 SUCLA2Q9P2R7 463 aaPredicted RBP1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 ZNF346Q9UL40 294 aaKnown RBP1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 RNF150Q9ULK6 438 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 ARID1AO14497 2285 aa1.71□□□□□ -2.13
ECHDC1-219ENST00000526299 TRAV9-2A0A087WT02 112 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 A0A1W2PPQ1 181 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 INPP4BO15327 924 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 SCO2O43819 266 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 SNX3O60493 162 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 FOXH1O75593 365 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 GJB3O75712 270 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 LYPD3O95274 346 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 SCGB1D1O95968 90 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 PFKFB1P16118 471 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 NONOQ15233 471 aaKnown RBP eCLIP1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 KBTBD6Q86V97 674 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 ENTHD1Q8IYW4 607 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 LPGAT1Q92604 370 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 FAM104AQ969W3 186 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 RANBP9Q96S59 729 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 RTBDNQ9BSG5 229 aaPredicted RBP1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 ARMCX1Q9P291 453 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 PLEKHA6Q9Y2H5 1048 aa1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 PTRH2Q9Y3E5 179 aaKnown RBP1.71□□□□□ -2.14
ECHDC1-219ENST00000526299 RNF123Q5XPI4 1314 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 CUL3Q13618 768 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 KNOP1Q1ED39 458 aaKnown RBP1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 C9orf129Q5T035 196 aaKnown RBP1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 PRR27Q6MZM9 219 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 IL17REQ8NFR9 667 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 OR4C15Q8NGM1 316 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 OR5M9Q8NGP3 310 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 ZNF721Q8TF20 911 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 RNF138Q8WVD3 245 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 TSACCQ96A04 125 aaPredicted RBP1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 RUNDC3BQ96NL0 473 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 IL12RB2Q99665 862 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 KCNMB3Q9NPA1 279 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 GSN-AS1Q9NRJ2 163 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 VNN3Q9NY84 501 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 SLC12A6Q9UHW9 1150 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 MRPL11Q9Y3B7 192 aaKnown RBP1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 RPS6KL1Q9Y6S9 549 aa1.7□□□□□ -2.14
ECHDC1-219ENST00000526299 LOC102723996A0A087X1L8 192 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 RPS6KA5O75582 802 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 RAB40ALP0C0E4 278 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 ACHEP22303 614 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 MAN1A1P33908 653 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 MEOX2P50222 304 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 BTG1P62324 171 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 SNAPC1Q16533 368 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 GSG1Q2KHT4 349 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 POM121L1PQ3SYA9 428 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 CGB2Q6NT52 195 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 Q7L0L9 218 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 ZNF525Q8N782 197 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 BANPQ8N9N5 519 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 LINC01006Q8NI28 216 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 GTSF1Q8WW33 167 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 CASP10Q92851 521 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 PAPOLGQ9BWT3 736 aaKnown RBP1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 HES7Q9BYE0 225 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 SDCBP2Q9H190 292 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 GOLPH3LQ9H4A5 285 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 KCNK13Q9HB14 408 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 CDH20Q9HBT6 801 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 RAVER2Q9HCJ3 691 aaKnown RBP1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 DEPPQ9NTK1 212 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 POLKQ9UBT6 870 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 IL36AQ9UHA7 158 aa1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 CPSF3Q9UKF6 684 aaKnown RBP1.69□□□□□ -2.14
ECHDC1-219ENST00000526299 LOC100509620A0A075B734 347 aa1.68□□□□□ -2.14
ECHDC1-219ENST00000526299 A0A1W2PPK0 400 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms