RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 NPPAP01160 153 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 CALRP27797 417 aaKnown RBP12.21□□□□□ -0.45
NELFE-209ENST00000488426 SERPINB1P30740 379 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 SHMT2P34897 504 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 BLKP51451 505 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 FOXC1Q12948 553 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 EIF2B5Q13144 721 aaKnown RBP12.21□□□□□ -0.45
NELFE-209ENST00000488426 DDX39BQ13838 428 aaKnown RBP12.21□□□□□ -0.45
NELFE-209ENST00000488426 FZD2Q14332 565 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 KPNB1Q14974 876 aaKnown RBP12.21□□□□□ -0.45
NELFE-209ENST00000488426 SNCBQ16143 134 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 SPIN4Q56A73 249 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 PIGGQ5H8A4 983 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 NOXRED1Q6NXP6 359 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 SLC30A9Q6PML9 568 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 RABEPKQ7Z6M1 372 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 NRROSQ86YC3 692 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 PHACTR4Q8IZ21 702 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 C2orf73Q8N5S3 287 aaPredicted RBP12.21□□□□□ -0.45
NELFE-209ENST00000488426 WDR60Q8WVS4 1066 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 CDRT15Q96T59 188 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 HOPXQ9BPY8 73 aaPredicted RBP12.21□□□□□ -0.45
NELFE-209ENST00000488426 AIF1LQ9BQI0 150 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 NT5DC2Q9H857 520 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 SPAG4Q9NPE6 437 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 AASDHPPTQ9NRN7 309 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 MAP10Q9P2G4 905 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 RUVBL1Q9Y265 456 aaKnown RBP12.21□□□□□ -0.45
NELFE-209ENST00000488426 BTBD3Q9Y2F9 522 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 PCDHB11Q9Y5F2 797 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 CACNA1BQ00975 2339 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 C9JVG2 144 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 PDE5AO76074 875 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 EML2O95834 649 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 SDC1P18827 310 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 CCR8P51685 355 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 AFF3P51826 1226 aaKnown RBP12.21□□□□□ -0.46
NELFE-209ENST00000488426 CLNS1AP54105 237 aaKnown RBP12.21□□□□□ -0.46
NELFE-209ENST00000488426 CLDN8P56748 225 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 ACTR3P61158 418 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 SIM1P81133 766 aaPredicted RBP12.21□□□□□ -0.46
NELFE-209ENST00000488426 ACSM2AQ08AH3 577 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 PTGR1Q14914 329 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 TLR1Q15399 786 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 TIGD2Q4W5G0 525 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 C1orf146Q5VVC0 180 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 ACSM2BQ68CK6 577 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 TMIGD1Q6UXZ0 262 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 RIPOR1Q6ZS17 1223 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 IQCHQ86VS3 1027 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 PARGQ86W56 976 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 RNF175Q8N4F7 328 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 MFSD2AQ8NA29 543 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 OR4K1Q8NGD4 311 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 CCL4L1Q8NHW4 92 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 ZFPM2Q8WW38 1151 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 CXorf40BQ96DE9 158 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 C11orf24Q96F05 449 aaPredicted RBP12.21□□□□□ -0.46
NELFE-209ENST00000488426 APOLD1Q96LR9 279 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 ACAT2Q9BWD1 397 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 CLMPQ9H6B4 373 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 DMRT3Q9NQL9 472 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 SIRT5Q9NXA8 310 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 OR6C2Q9NZP2 312 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 DLGAP4Q9Y2H0 992 aa12.21□□□□□ -0.46
NELFE-209ENST00000488426 USP24Q9UPU5 2620 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 ARID1BQ8NFD5 2236 aaPredicted RBP12.2□□□□□ -0.46
NELFE-209ENST00000488426 ASPDHA6ND91 283 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 PRMT3O60678 531 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 CBFA2T3O75081 653 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 MYO1DO94832 1006 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 CCNDBP1O95273 360 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 IL6P05231 212 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 RPS13P62277 151 aaKnown RBP12.2□□□□□ -0.46
NELFE-209ENST00000488426 ABATP80404 500 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 REEP5Q00765 189 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 PRDX1Q06830 199 aaKnown RBP12.2□□□□□ -0.46
NELFE-209ENST00000488426 HPS6Q86YV9 775 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 DPP10Q8N608 796 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 OR2A1Q8NGT9 310 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 CHTF18Q8WVB6 975 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 VPS33AQ96AX1 596 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 SLC45A3Q96JT2 553 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 GPATCH1Q9BRR8 931 aaKnown RBP12.2□□□□□ -0.46
NELFE-209ENST00000488426 RHBGQ9H310 441 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 XKR8Q9H6D3 395 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 ZNF624Q9P2J8 865 aaPredicted RBP12.2□□□□□ -0.46
NELFE-209ENST00000488426 MAPRE3Q9UPY8 281 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 POMPQ9Y244 141 aa12.2□□□□□ -0.46
NELFE-209ENST00000488426 A0A1W2PR77 199 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 OR5K4A6NMS3 321 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 TRIM38O00635 465 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 PRICKLE3O43900 615 aaPredicted RBP12.19□□□□□ -0.46
NELFE-209ENST00000488426 ENTPD5O75356 428 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 ME2P23368 584 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 PSMB5P28074 263 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 CD38P28907 300 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 CTSKP43235 329 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 C21orf58P58505 322 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 RACK1P63244 317 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms