RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 SMPD1P17405 629 aa7.25□□□□□ -1.25
APP-206ENST00000359726 ATF4P18848 351 aaPredicted RBP7.25□□□□□ -1.25
APP-206ENST00000359726 RORCP51449 518 aa7.25□□□□□ -1.25
APP-206ENST00000359726 NUDT6P53370 316 aa7.25□□□□□ -1.25
APP-206ENST00000359726 ZNF33BQ06732 778 aa7.25□□□□□ -1.25
APP-206ENST00000359726 XKR4Q5GH76 650 aa7.25□□□□□ -1.25
APP-206ENST00000359726 TYW3Q6IPR3 259 aaKnown RBP7.25□□□□□ -1.25
APP-206ENST00000359726 EIF3MQ7L2H7 374 aaKnown RBP7.25□□□□□ -1.25
APP-206ENST00000359726 OVCH2Q7RTZ1 564 aa7.25□□□□□ -1.25
APP-206ENST00000359726 CTU1Q7Z7A3 348 aaKnown RBP7.25□□□□□ -1.25
APP-206ENST00000359726 ZNF683Q8IZ20 524 aa7.25□□□□□ -1.25
APP-206ENST00000359726 TAGAPQ8N103 731 aa7.25□□□□□ -1.25
APP-206ENST00000359726 LIX1Q8N485 282 aa7.25□□□□□ -1.25
APP-206ENST00000359726 CARNMT1Q8N4J0 409 aa7.25□□□□□ -1.25
APP-206ENST00000359726 OR4F6Q8NGB9 312 aa7.25□□□□□ -1.25
APP-206ENST00000359726 OR56A4Q8NGH8 313 aa7.25□□□□□ -1.25
APP-206ENST00000359726 ARRDC2Q8TBH0 407 aa7.25□□□□□ -1.25
APP-206ENST00000359726 HERVK_113Q902F9 699 aa7.25□□□□□ -1.25
APP-206ENST00000359726 UFD1Q92890 307 aa7.25□□□□□ -1.25
APP-206ENST00000359726 KIF12Q96FN5 646 aa7.25□□□□□ -1.25
APP-206ENST00000359726 CCM2Q9BSQ5 444 aa7.25□□□□□ -1.25
APP-206ENST00000359726 GHITMQ9H3K2 345 aa7.25□□□□□ -1.25
APP-206ENST00000359726 AMBNQ9NP70 447 aa7.25□□□□□ -1.25
APP-206ENST00000359726 MED9Q9NWA0 146 aa7.25□□□□□ -1.25
APP-206ENST00000359726 PCDH10Q9P2E7 1040 aa7.25□□□□□ -1.25
APP-206ENST00000359726 EIF2B4Q9UI10 523 aaKnown RBP7.25□□□□□ -1.25
APP-206ENST00000359726 RIMKLBQ9ULI2 386 aa7.25□□□□□ -1.25
APP-206ENST00000359726 PADI2Q9Y2J8 665 aa7.25□□□□□ -1.25
APP-206ENST00000359726 SF3B6Q9Y3B4 125 aaKnown RBP7.25□□□□□ -1.25
APP-206ENST00000359726 PCDHGB7Q9Y5F8 929 aa7.25□□□□□ -1.25
APP-206ENST00000359726 UTRNP46939 3433 aa7.25□□□□□ -1.25
APP-206ENST00000359726 NPEPPSL1A6NEC2 478 aa7.25□□□□□ -1.25
APP-206ENST00000359726 FABP7O15540 132 aa7.25□□□□□ -1.25
APP-206ENST00000359726 OGNP20774 298 aaKnown RBP7.25□□□□□ -1.25
APP-206ENST00000359726 WARSP23381 471 aaKnown RBP7.25□□□□□ -1.25
APP-206ENST00000359726 MAP2K3P46734 347 aa7.25□□□□□ -1.25
APP-206ENST00000359726 RABGGTBP53611 331 aa7.25□□□□□ -1.25
APP-206ENST00000359726 MAB21L1Q13394 359 aa7.25□□□□□ -1.25
APP-206ENST00000359726 MAPKAPK3Q16644 382 aa7.25□□□□□ -1.25
APP-206ENST00000359726 COL28A1Q2UY09 1125 aa7.25□□□□□ -1.25
APP-206ENST00000359726 AP5B1Q2VPB7 878 aa7.25□□□□□ -1.25
APP-206ENST00000359726 LGALSLQ3ZCW2 172 aaPredicted RBP7.25□□□□□ -1.25
APP-206ENST00000359726 PLA1AQ53H76 456 aa7.25□□□□□ -1.25
APP-206ENST00000359726 PLAG1Q6DJT9 500 aa7.25□□□□□ -1.25
APP-206ENST00000359726 GCNT7Q6ZNI0 430 aa7.25□□□□□ -1.25
APP-206ENST00000359726 HTR3DQ70Z44 454 aa7.25□□□□□ -1.25
APP-206ENST00000359726 SYNPOQ8N3V7 929 aa7.25□□□□□ -1.25
APP-206ENST00000359726 OR8K5Q8NH50 307 aa7.25□□□□□ -1.25
APP-206ENST00000359726 UCN3Q969E3 161 aa7.25□□□□□ -1.25
APP-206ENST00000359726 TMEM43Q9BTV4 400 aa7.25□□□□□ -1.25
APP-206ENST00000359726 THUMPD3Q9BV44 507 aaKnown RBP7.25□□□□□ -1.25
APP-206ENST00000359726 RACGAP1Q9H0H5 632 aa7.25□□□□□ -1.25
APP-206ENST00000359726 TKTL2Q9H0I9 626 aa7.25□□□□□ -1.25
APP-206ENST00000359726 SCPEP1Q9HB40 452 aa7.25□□□□□ -1.25
APP-206ENST00000359726 ZNF304Q9HCX3 659 aa7.25□□□□□ -1.25
APP-206ENST00000359726 PPT2Q9UMR5 302 aa7.25□□□□□ -1.25
APP-206ENST00000359726 DENND4AQ7Z401 1863 aa7.25□□□□□ -1.25
APP-206ENST00000359726 SUPT3HB4E1H0 165 aa7.25□□□□□ -1.25
APP-206ENST00000359726 I3L521 148 aa7.25□□□□□ -1.25
APP-206ENST00000359726 ARHGEF9O43307 516 aa7.25□□□□□ -1.25
APP-206ENST00000359726 SMAD6O43541 496 aaKnown RBP7.25□□□□□ -1.25
APP-206ENST00000359726 SCN2BO60939 215 aa7.25□□□□□ -1.25
APP-206ENST00000359726 PTP4A3O75365 173 aa7.25□□□□□ -1.25
APP-206ENST00000359726 CFDP00746 253 aaPredicted RBP7.25□□□□□ -1.25
APP-206ENST00000359726 IL1AP01583 271 aa7.25□□□□□ -1.25
APP-206ENST00000359726 TFPIP10646 304 aa7.25□□□□□ -1.25
APP-206ENST00000359726 SLC2A3P11169 496 aa7.25□□□□□ -1.25
APP-206ENST00000359726 SRCP12931 536 aa7.25□□□□□ -1.25
APP-206ENST00000359726 ITPKAP23677 461 aa7.25□□□□□ -1.25
APP-206ENST00000359726 CHRNA5P30532 468 aa7.25□□□□□ -1.25
APP-206ENST00000359726 HOXA11P31270 313 aaPredicted RBP7.25□□□□□ -1.25
APP-206ENST00000359726 IRS1P35568 1242 aa7.25□□□□□ -1.25
APP-206ENST00000359726 EPHA5P54756 1037 aa7.25□□□□□ -1.25
APP-206ENST00000359726 GAS1P54826 345 aa7.25□□□□□ -1.25
APP-206ENST00000359726 EXOSC2Q13868 293 aaKnown RBP7.25□□□□□ -1.25
APP-206ENST00000359726 PTPRCAPQ14761 206 aa7.25□□□□□ -1.25
APP-206ENST00000359726 QPRTQ15274 297 aa7.25□□□□□ -1.25
APP-206ENST00000359726 TIMM50Q3ZCQ8 353 aa7.25□□□□□ -1.25
APP-206ENST00000359726 GPR153Q6NV75 609 aa7.25□□□□□ -1.25
APP-206ENST00000359726 EFCAB12Q6NXP0 572 aa7.25□□□□□ -1.25
APP-206ENST00000359726 B3GALNT2Q8NCR0 500 aa7.25□□□□□ -1.25
APP-206ENST00000359726 OR6B3Q8NGW1 331 aa7.25□□□□□ -1.25
APP-206ENST00000359726 UBASH3BQ8TF42 649 aa7.25□□□□□ -1.25
APP-206ENST00000359726 MSANTD3Q96H12 275 aa7.25□□□□□ -1.25
APP-206ENST00000359726 SENP5Q96HI0 755 aaPredicted RBP7.25□□□□□ -1.25
APP-206ENST00000359726 TNIP3Q96KP6 325 aa7.25□□□□□ -1.25
APP-206ENST00000359726 LINC00052Q96N35 136 aa7.25□□□□□ -1.25
APP-206ENST00000359726 NIPSNAP1Q9BPW8 284 aa7.25□□□□□ -1.25
APP-206ENST00000359726 CNPPD1Q9BV87 410 aa7.25□□□□□ -1.25
APP-206ENST00000359726 NXF3Q9H4D5 531 aaKnown RBP7.25□□□□□ -1.25
APP-206ENST00000359726 MS4A12Q9NXJ0 267 aa7.25□□□□□ -1.25
APP-206ENST00000359726 TEKT2Q9UIF3 430 aa7.25□□□□□ -1.25
APP-206ENST00000359726 RNF112Q9ULX5 631 aa7.25□□□□□ -1.25
APP-206ENST00000359726 SH3D21A4FU49 640 aa7.24□□□□□ -1.25
APP-206ENST00000359726 OR1I1O60431 355 aa7.24□□□□□ -1.25
APP-206ENST00000359726 GPX2P18283 190 aa7.24□□□□□ -1.25
APP-206ENST00000359726 RPS3P23396 243 aaKnown RBP eCLIP7.24□□□□□ -1.251e-7■■■□□ 16.2
APP-206ENST00000359726 ARPP19P56211 112 aa7.24□□□□□ -1.25
APP-206ENST00000359726 BTG1P62324 171 aa7.24□□□□□ -1.25
APP-206ENST00000359726 PLIN5Q00G26 463 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms