RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 HLA-DPA1P20036 260 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 TALDO1P37837 337 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 CTBP2P56545 445 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 ZNF33BQ06732 778 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 VGLL4Q14135 290 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 INSL4Q14641 139 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 KCNA10Q16322 511 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 KRT73Q86Y46 540 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 OR8K3Q8NH51 312 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 ATOH8Q96SQ7 321 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 R3HDMLQ9H3Y0 253 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 B3GNT2Q9NY97 397 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 GJD2Q9UKL4 321 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 ACTL7AQ9Y615 435 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 TEX51A0A1B0GUA7 166 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 ATG13O75143 517 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 HAPLN1P10915 354 aaPredicted RBP13.94□□□□□ -0.18
CDT1-201ENST00000301019 ITGAMP11215 1152 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 SRCP12931 536 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 ACPPP15309 386 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 GJA1P17302 382 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 CXCL3P19876 107 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 SDC2P34741 201 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 RORCP51449 518 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 CDH12P55289 794 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 KCTD2Q14681 263 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 FAM160B1Q5W0V3 765 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 FAM92BQ6ZTR7 304 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 ZNF551Q7Z340 670 aaPredicted RBP13.94□□□□□ -0.18
CDT1-201ENST00000301019 CNTN4Q8IWV2 1026 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 OR4F6Q8NGB9 312 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 OLA1Q9NTK5 396 aaKnown RBP13.94□□□□□ -0.18
CDT1-201ENST00000301019 HRH3Q9Y5N1 445 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 INMT-MINDY4F8WBC2 141 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 J3KR12 359 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 ANXA9O76027 345 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 ZNF30P17039 623 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 AVPR1BP47901 424 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 HSPA7P48741 367 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 MBTD1Q05BQ5 628 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 CPSF6Q16630 551 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDT1-201ENST00000301019 LEXMQ3ZCV2 418 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 DDI2Q5TDH0 399 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 PIK3R6Q5UE93 754 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 LINC00518Q8N0U6 118 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 EEF1AKMT1Q8WVE0 214 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 C1GALT1C1Q96EU7 318 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 MYO19Q96H55 970 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 EXOC2Q96KP1 924 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 SLC9A7Q96T83 725 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 COLEC11Q9BWP8 271 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 GORASP2Q9H8Y8 452 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 ANKHQ9HCJ1 492 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 STARD7Q9NQZ5 370 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 HSPE1-MOB4S4R3N1 261 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 J3KTA2 159 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 GATBO75879 557 aaKnown RBP13.93□□□□□ -0.18
CDT1-201ENST00000301019 GLP2RO95838 553 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 UROSP10746 265 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 SMPD1P17405 629 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 CSKP41240 450 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 RAB14P61106 215 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 B2MP61769 119 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 PSPHP78330 225 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 INO80DQ53TQ3 878 aaPredicted RBP13.93□□□□□ -0.18
CDT1-201ENST00000301019 KIAA0930Q6ICG6 404 aaPredicted RBP13.93□□□□□ -0.18
CDT1-201ENST00000301019 SNX20Q7Z614 316 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 STPG2Q8N412 459 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 DNAJB8Q8NHS0 232 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 STAG3L4Q8TBR4 150 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 PIGKQ92643 395 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 EBPLQ9BY08 206 aa13.93□□□□□ -0.18
CDT1-201ENST00000301019 UXTQ9UBK9 157 aaPredicted RBP13.93□□□□□ -0.18
CDT1-201ENST00000301019 AFF4Q9UHB7 1163 aaKnown RBP13.93□□□□□ -0.18
CDT1-201ENST00000301019 APOC3P02656 99 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 DNAJA1P31689 397 aaKnown RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 RRAS2P62070 204 aaPredicted RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 PAN2Q504Q3 1202 aaKnown RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 LCN1P1Q5VSP4 162 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 ADGRD2Q7Z7M1 963 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 PDZD3Q86UT5 571 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 ZNF366Q8N895 744 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 OR6M1Q8NGM8 313 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDT1-201ENST00000301019 BCL7CQ8WUZ0 217 aaPredicted RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 IPCEF1Q8WWN9 437 aaPredicted RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 ZIC5Q96T25 663 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 NPY6RQ99463 290 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 POLR2J2Q9GZM3 115 aaKnown RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 MIXL1Q9H2W2 232 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 CATSPERZQ9NTU4 200 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 GMEB2Q9UKD1 530 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 TRAV20A0A0B4J274 112 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 C19orf81C9J6K1 198 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 ADAMDEC1O15204 470 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 CD3EAPO15446 510 aaKnown RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 HPGDSO60760 199 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 IFNA16P05015 189 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 VIPR1P32241 457 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 HK3P52790 923 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms