RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Zbtb46Q8BID6 600 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Chrnb3Q8BMN3 464 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Olfr1176Q8VG40 315 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Rmnd5bQ91YQ7 393 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Cstf3Q99LI7 717 aaKnown RBP15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Pwp1Q99LL5 501 aaKnown RBP15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Gm16286Q9CQX6 220 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Prps2Q9CS42 318 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Hhipl2Q9D2G9 717 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Slc19a2Q9EQN9 498 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Lmx1aQ9JKU8 382 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Kctd14A0A0U1RNG7 287 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 L3mbtl4B1B1A0 621 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Gm20441G3UYJ7 252 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Galnt9G3X942 604 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 AprtP08030 180 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Guca1aP43081 202 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Hnf4aP49698 474 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Csf2raQ00941 388 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Nol9Q3TZX8 714 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 MthfsdQ3URQ7 372 aaKnown RBP15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Nr1h2Q60644 446 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Tp53bp2Q8CG79 1128 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Vps37aQ8CHS8 397 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Cant1Q8VCF1 403 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Olfr1276Q8VF40 312 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Vmn1r71Q8VIC0 307 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Camk2gQ923T9 529 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Art4Q9CRA0 300 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Prl7c1Q9CRB5 251 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Hyal6Q9D4E9 494 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 Rhobtb1Q9DAK3 695 aa15.32■□□□□ 0.04
Trim39-203ENSMUST00000113706 IsxA1A546 240 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ctnnd2O35927 1247 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Asrgl1Q8C0M9 326 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Cstf2tQ8C7E9 632 aaKnown RBP15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Sertm1Q8CD78 107 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Vps50Q8CI71 964 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Pcdhb21Q91V48 774 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Gorasp1Q91X51 446 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Asf1aQ9CQE6 204 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Slco1c1Q9ERB5 715 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Fads3Q9JJE7 449 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ninj2Q9JL89 143 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Vps29Q9QZ88 182 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ate1Q9Z2A5 516 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 CercamA3KGW5 592 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Gm8011K7N6Y5 207 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 EnpepP16406 945 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ptpn6P29351 595 aaKnown RBP15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Kcnj5P48545 419 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Pdcd4Q61823 469 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Olfr1418Q7TQS3 318 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Lrrtm4Q80XG9 590 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Plcl2Q8K394 1128 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Defb35Q8R2I3 63 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Shmt2Q9CZN7 504 aaKnown RBP15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 CutalQ9D1U5 156 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Col4a4Q9QZR9 1682 aa15.31■□□□□ 0.04
Trim39-203ENSMUST00000113706 Itih4A6X935 942 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Zfp992B1ASD8 573 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Otud3B1AZ99 396 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Zfp558E9Q1J0 407 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Rab8aP55258 207 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Mapk1P63085 358 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Cfap20Q8BTU1 193 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Tmem62Q8BXJ9 643 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ccm2Q8K2Y9 453 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Zfp991Q8R1N3 573 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Olfr1263Q8VG63 306 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Fig4Q91WF7 907 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Pcyt2Q922E4 404 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Get4Q9D1H7 327 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Mad2l1Q9Z1B5 205 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 GsnP13020 780 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 CatP24270 527 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Fpr1P33766 364 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Elk4P41158 430 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Kcnj13P86046 360 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Hdgfl2Q3UMU9 669 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 OgnQ62000 298 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Rps9Q6ZWN5 194 aaKnown RBP15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Atl1Q8BH66 558 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Znf410Q8BKX7 478 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Gykl1Q8C635 549 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Olfr1302Q8VGE9 315 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Asb9Q91ZT8 290 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Rab28Q99KL7 221 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 ItgaxQ9QXH4 1169 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Hk2O08528 917 aaKnown RBP15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Btnl2O70355 454 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Fam98aQ3TJZ6 515 aaKnown RBP15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Xkr9Q5GH62 373 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 NkaplQ5SZT7 395 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ifi47Q61635 420 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Cyp4b1Q64462 511 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Rnf220Q6PDX6 566 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Spag4Q9JJF2 443 aa15.3■□□□□ 0.04
Trim39-203ENSMUST00000113706 Vmn1r169L7N275 304 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Capn5O08688 640 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms