RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Rhox2bA2A447 191 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Rhox2cA2AWL9 191 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ttll2A4Q9E4 540 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Zfp952B0V2W4 504 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ddx43D3Z6P9 646 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm44G3UW88 330 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Grem1O70326 184 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Hnf4aP49698 474 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Kcnj12P52187 427 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Kcnj8P97794 424 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Lingo4Q149C3 593 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cdkl4Q3TZA2 342 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 RasefQ5RI75 627 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Slc39a10Q6P5F6 833 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Adam39Q7M762 756 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Thnsl2Q80W22 483 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Slc2a12Q8BFW9 622 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Zc3h14Q8BJ05 735 aaKnown RBP9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Snx16Q8C080 344 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Prkd3Q8K1Y2 889 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Kcnc4Q8R1C0 628 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Vmn1r201Q8R262 300 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Vmn1r214Q8R279 367 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Vmn1r234Q8R298 329 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ints14Q8R3P6 515 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Kctd5Q8VC57 234 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Prps2Q9CS42 318 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cep97Q9CZ62 856 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Fbxo8Q9QZN3 319 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cst9Q9Z0H6 137 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Prrg1A2BFE8 218 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm340F6RGI3 1242 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Dnajb5O89114 348 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Mtnd1P03888 318 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Chrm4P32211 479 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tead2P48301 445 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Nat1P50294 290 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 ErgP81270 486 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tstd2Q3U269 495 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Slc10a7Q5PT53 340 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Hsd3b5Q61694 373 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gpalpp1Q69ZC8 346 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Larp4bQ6A0A2 741 aaKnown RBP9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Mfsd13aQ6PDE8 519 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ptbp3Q8BHD7 523 aaKnown RBP9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Guf1Q8C3X4 651 aaKnown RBP9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tmem30aQ8VEK0 364 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Acsm1Q91VA0 573 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cyp2j9Q924D1 502 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cdc20Q9JJ66 499 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cldn7Q9Z261 211 aa9.48□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Crisp4E9PVG4 293 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr287E9PZS7 322 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Vmn1r184E9Q2N4 314 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Xkr6E9Q6C8 638 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tsga10ipF7A1F0 157 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm2888K7N746 267 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm3138K7N754 218 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr319L7MTY4 306 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 TecP24604 630 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Acvr2aP27038 513 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Slc16a1P53986 493 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Acod1P54987 488 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 GcgP55095 180 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ap1s1P61967 158 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Scgb1a1Q06318 96 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Fam47cQ14BE7 430 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Q3U7U4 132 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Slc17a4Q5NCM1 492 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Fzd4Q61088 537 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Sf1Q64213 653 aaKnown RBP9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Abcg1Q64343 666 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Csgalnact1Q8BJQ9 530 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Plekhn1Q8C886 359 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 SynpoQ8CC35 929 aaKnown RBP9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tnfaip8l1Q8K288 186 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Defb19Q8K3I8 83 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr690Q8VH18 315 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Pcdhgb2Q91XX7 928 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Mrpl9Q99N94 265 aaKnown RBP9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Prl7c1Q9CRB5 251 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cby3Q9CVN6 235 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Hyal6Q9D4E9 494 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Aph1cQ9DCZ9 258 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Trpv4Q9EPK8 871 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Vmn1r65Q9EPS7 332 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Krt81Q9ERE2 481 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ing1Q9QXV3 279 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cpne6Q9Z140 557 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm7682A0A0J9YUM1 481 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tbc1d25A1A5B6 742 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr1123A2AT85 323 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ttc23lA6H6E9 458 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tsc22d2E9Q7M2 769 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Fbxw9F8VPX2 458 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Zfp846G3X996 541 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Slc22a2O70577 553 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cd160O88875 185 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 P01878 344 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Hyal4Q05A56 481 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms