RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ATP5F1P24539 256 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 PSMB5P28074 263 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 PTPN4P29074 926 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 CRHR1P34998 444 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 RORAP35398 523 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 DLSTP36957 453 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 GABRA4P48169 554 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 PRKAA2P54646 552 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 RRADP55042 308 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 ARF3P61204 181 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 CSNK1G2P78368 415 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 NFKB2Q00653 900 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 MEF2AQ02078 507 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 ZNF33BQ06732 778 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 DNASE1L3Q13609 305 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 SETDB1Q15047 1291 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 OR4D1Q15615 310 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 ZIC1Q15915 447 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 PFKFB4Q16877 469 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 PRTGQ2VWP7 1150 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 TMEM35AQ53FP2 167 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 XKR6Q5GH73 641 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 FBXO42Q6P3S6 717 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 INO80CQ6PI98 192 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 LRIG3Q6UXM1 1119 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 CHSY3Q70JA7 882 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 GPR155Q7Z3F1 870 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 ASPGQ86U10 573 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 PPFIBP2Q8ND30 876 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 MYRIPQ8NFW9 859 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 ADAMTS18Q8TE60 1221 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 PPP4R1Q8TF05 950 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 NEIL2Q969S2 332 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 ATP6V1E2Q96A05 226 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 PTERQ96BW5 349 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 PYCR2Q96C36 320 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 WDR34Q96EX3 536 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 SMC6Q96SB8 1091 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 KLHL25Q9H0H3 589 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 SLC26A1Q9H2B4 701 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 ANKHQ9HCJ1 492 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 ZNF304Q9HCX3 659 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 PRM3Q9NNZ6 103 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 SLC6A20Q9NP91 592 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 PSD3Q9NYI0 1048 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 COPG2Q9UBF2 871 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 LGALS13Q9UHV8 139 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 TSC22D4Q9Y3Q8 395 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 PCDHGA4Q9Y5G9 962 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 ANKRD12Q6UB98 2062 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 HEATR5BQ9P2D3 2071 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 TLDC2A0PJX2 215 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 CTSVO60911 334 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 CLEC3AO75596 197 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 RFPL1O75677 317 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 SNUPNO95149 360 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 OTCP00480 354 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 PIK3CBP42338 1070 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 TSFMP43897 325 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 SCTRP47872 440 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 GLRBP48167 497 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 DSG2Q14126 1118 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 SSPNQ14714 243 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 NCF4Q15080 339 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 TECRLQ5HYJ1 363 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 MBOAT1Q6ZNC8 495 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 TTLL10Q6ZVT0 673 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 TMPRSS11BQ86T26 416 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 SRRM1Q8IYB3 904 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 SPATA6LQ8N4H0 392 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 LRRN4CLQ8ND94 238 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 NT5CQ8TCD5 201 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 NAF1Q96HR8 494 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 FAR2Q96K12 515 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 PPM1MQ96MI6 270 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 ACTR8Q9H981 624 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 MKKSQ9NPJ1 570 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 PFDN4Q9NQP4 134 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 PCMTD2Q9NV79 361 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 MKS1Q9NXB0 559 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 CPSF2Q9P2I0 782 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 ZNF282Q9UDV7 671 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 TBK1Q9UHD2 729 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 CROTQ9UKG9 612 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 POLHQ9Y253 713 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 MAP4K5Q9Y4K4 846 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 SPACA6W5XKT8 324 aa9.8□□□□□ -0.84
TRAFD1-208ENST00000552890 IGKV1-8A0A0C4DH67 115 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 BLACEA4D250 179 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 H3BMH7 237 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 UBXN8O00124 270 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 AGRPO00253 132 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 PEX12O00623 359 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 HAT1O14929 419 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 RGS16O15492 202 aaPredicted RBP9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 EFSO43281 561 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 CREG1O75629 220 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 NSA2O95478 260 aaKnown RBP9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 MYL2P10916 166 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 PYGBP11216 843 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms