RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 LOC110117498-PIK3R3F6TDL0 507 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 SNX4O95219 450 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 PIK3CBP42338 1070 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 KCNJ10P78508 379 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 ARF5P84085 180 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 ST3GAL4Q11206 333 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 C10orf62Q5T681 223 aaPredicted RBP13.27□□□□□ -0.29
HDAC7-228ENST00000548938 ERICH5Q6P6B1 374 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 RBFAQ8N0V3 343 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 SLC5A8Q8N695 610 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 ASCC1Q8N9N2 400 aaKnown RBP13.27□□□□□ -0.29
HDAC7-228ENST00000548938 RNF38Q9H0F5 515 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 ASB8Q9H765 288 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 ADPRHL2Q9NX46 363 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 ZNF226Q9NYT6 803 aa13.27□□□□□ -0.29
HDAC7-228ENST00000548938 PNMA8CA0A1B0GUJ8 204 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 CD160O95971 181 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 TNFRSF1BP20333 461 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 RPS3P23396 243 aaKnown RBP eCLIP13.26□□□□□ -0.29
HDAC7-228ENST00000548938 HMGCLP35914 325 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 WNT3P56703 355 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 MTAPQ13126 283 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 DOC2BQ14184 412 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 UGT8Q16880 541 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 ZFP69Q49AA0 526 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 FBXO43Q4G163 708 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 FAM26DQ5JW98 314 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 GPRC6AQ5T6X5 926 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 MLIPQ5VWP3 458 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 LHX8Q68G74 356 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 GPR155Q7Z3F1 870 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 TSEN54Q7Z6J9 526 aaKnown RBP13.26□□□□□ -0.29
HDAC7-228ENST00000548938 OR8H2Q8N162 312 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 CDC26Q8NHZ8 85 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 PXYLP1Q8TE99 480 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 MAL2Q969L2 176 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 OR2A14Q96R47 310 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 OR5M11Q96RB7 305 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 SNX18Q96RF0 628 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 NPAP1Q9NZP6 1156 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 AFF4Q9UHB7 1163 aaKnown RBP13.26□□□□□ -0.29
HDAC7-228ENST00000548938 SLC6A14Q9UN76 642 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 SCO2O43819 266 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 CYP7B1O75881 506 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 INHAP05111 366 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 ADRA2AP08913 450 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 NAT1P18440 290 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 ZXDCQ2QGD7 858 aaPredicted RBP13.26□□□□□ -0.29
HDAC7-228ENST00000548938 ATXN7L2Q5T6C5 722 aaPredicted RBP13.26□□□□□ -0.29
HDAC7-228ENST00000548938 NCEH1Q6PIU2 408 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 C16orf59Q7L2K0 433 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 DENND1CQ8IV53 801 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 ADGRG2Q8IZP9 1017 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 SDR16C5Q8N3Y7 309 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 UTP15Q8TED0 518 aaKnown RBP13.26□□□□□ -0.29
HDAC7-228ENST00000548938 PIK3R3Q92569 461 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 RAD9AQ99638 391 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 ARPC5LQ9BPX5 153 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 ARL15Q9NXU5 204 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 KCNE1BA0A087WTH5 132 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 YY2O15391 372 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 SCN2BO60939 215 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 SOX6P35712 828 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 OR1G1P47890 313 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 NFATC2Q13469 925 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 GPR50Q13585 617 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 CTXN3Q4LDR2 81 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 RNF219Q5W0B1 726 aaPredicted RBP13.26□□□□□ -0.29
HDAC7-228ENST00000548938 NOXRED1Q6NXP6 359 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 ZNF605Q86T29 641 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 SYNPOQ8N3V7 929 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 OR52J3Q8NH60 311 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 CMTM7Q96FZ5 175 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 ST6GAL2Q96JF0 529 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 CEP19Q96LK0 163 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 SLC30A2Q9BRI3 323 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 BTBD3Q9Y2F9 522 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 PCDHGB3Q9Y5G1 929 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 PCDHGA2Q9Y5H1 932 aa13.26□□□□□ -0.29
HDAC7-228ENST00000548938 KRT87PA6NCN2 255 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 TMEM229AB2RXF0 380 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 TNFRSF11BO00300 401 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 CAPN5O15484 640 aaPredicted RBP13.25□□□□□ -0.29
HDAC7-228ENST00000548938 SEMA3DO95025 777 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 CKBP12277 381 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 AMD1P17707 334 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 GABRB1P18505 474 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 MAPK1P28482 360 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 PPIGQ13427 754 aaKnown RBP eCLIP13.25□□□□□ -0.298e-6■■■■□ 22.7
HDAC7-228ENST00000548938 IRF3Q14653 427 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 TSTQ16762 297 aaKnown RBP13.25□□□□□ -0.29
HDAC7-228ENST00000548938 NEK5Q6P3R8 708 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 MSANTD1Q6ZTZ1 278 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 SYT12Q8IV01 421 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 FAM9CQ8IZT9 166 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 OR10G2Q8NGC3 310 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 OR6K2Q8NGY2 324 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 SPPL2AQ8TCT8 520 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 NIPSNAP1Q9BPW8 284 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 CCM2Q9BSQ5 444 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms