RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 POM121L2Q96KW2 1035 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 LINC00479Q96M42 142 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 AK8Q96MA6 479 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 NSMCE3Q96MG7 304 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 KRT12Q99456 494 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 CITED2Q99967 270 aaPredicted RBP2.86□□□□□ -1.95
TARDBP-208ENST00000477447 MCRIP2Q9BUT9 160 aaKnown RBP2.86□□□□□ -1.95
TARDBP-208ENST00000477447 GFRA4Q9GZZ7 299 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 MINDY3Q9H8M7 445 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 ZDHHC18Q9NUE0 388 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 PANK4Q9NVE7 773 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 TBC1D13Q9NVG8 400 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 ELF5Q9UKW6 265 aaPredicted RBP2.86□□□□□ -1.95
TARDBP-208ENST00000477447 RUVBL2Q9Y230 463 aaKnown RBP2.86□□□□□ -1.95
TARDBP-208ENST00000477447 SELENOKQ9Y6D0 94 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 CSNK1G3Q9Y6M4 447 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 IL16Q14005 1332 aa2.86□□□□□ -1.95
TARDBP-208ENST00000477447 MTMR11A4FU01 709 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 C5orf52A6NGY3 159 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.85□□□□□ -1.95
TARDBP-208ENST00000477447 TMEM150CB9EJG8 249 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 E5RGE8 158 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 H3BMM5 538 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 SELENOFO60613 162 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 SIX3O95343 332 aaPredicted RBP2.85□□□□□ -1.95
TARDBP-208ENST00000477447 RLN1P04808 185 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 ZSCAN5DPP0CG00 497 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 CD59P13987 128 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 PRKACGP22612 351 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 AADACP22760 399 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 HLA-FP30511 346 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 SOX3P41225 446 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 CDX1P47902 265 aaPredicted RBP2.85□□□□□ -1.95
TARDBP-208ENST00000477447 RGS19P49795 217 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 LUMP51884 338 aaPredicted RBP2.85□□□□□ -1.95
TARDBP-208ENST00000477447 BFSP1Q12934 665 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 MTF1Q14872 753 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 TAB1Q15750 504 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 CDO1Q16878 200 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 KRTAP27-1Q3LI81 207 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 FGD3Q5JSP0 725 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 CES4AQ5XG92 561 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 NOTUMQ6P988 496 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 CHMP1BQ7LBR1 199 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 CPEB2Q7Z5Q1 589 aaKnown RBP2.85□□□□□ -1.95
TARDBP-208ENST00000477447 PHLDB2Q86SQ0 1253 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 KRTAP7-1Q8IUC3 87 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 KLHL7Q8IXQ5 586 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 GPC2Q8N158 579 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 SIX6OS1Q8N1H7 587 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 CORO2AQ92828 525 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 SLCO2A1Q92959 643 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 MR1Q95460 341 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 ERO1AQ96HE7 468 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 C18orf12Q96KH6 178 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 CCDC114Q96M63 670 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 ZNF599Q96NL3 588 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 NEDD4LQ96PU5 975 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 ZNF300Q96RE9 604 aaPredicted RBP2.85□□□□□ -1.95
TARDBP-208ENST00000477447 ADPGKQ9BRR6 497 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 TRIM51Q9BSJ1 452 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 SYT11Q9BT88 431 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 UPF3AQ9H1J1 476 aaKnown RBP2.85□□□□□ -1.95
TARDBP-208ENST00000477447 SH3GLB2Q9NR46 395 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 TEX10Q9NXF1 929 aaPredicted RBP2.85□□□□□ -1.95
TARDBP-208ENST00000477447 HACD3Q9P035 362 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 IL36AQ9UHA7 158 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 SLC12A6Q9UHW9 1150 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 PILRBQ9UKJ0 227 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 NSG2Q9Y328 171 aa2.85□□□□□ -1.95
TARDBP-208ENST00000477447 A0A1W2PRQ8 180 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 A8MVM7 634 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 SLC1A7O00341 560 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 NTN3O00634 580 aaPredicted RBP2.84□□□□□ -1.95
TARDBP-208ENST00000477447 CYTIPO60759 359 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 YES1P07947 543 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 TRIM49P0CI25 452 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 TRIM49CP0CI26 452 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 EEF2P13639 858 aaKnown RBP2.84□□□□□ -1.95
TARDBP-208ENST00000477447 GLULP15104 373 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 DPEP1P16444 411 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 RBMS1P29558 406 aaKnown RBP2.84□□□□□ -1.95
TARDBP-208ENST00000477447 TIA1P31483 386 aaKnown RBP eCLIP2.84□□□□□ -1.952e-7■■■□□ 17.4
TARDBP-208ENST00000477447 DUTP33316 252 aaKnown RBP2.84□□□□□ -1.95
TARDBP-208ENST00000477447 HUNKP57058 714 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 OR1D5P58170 312 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 HILS1P60008 231 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 IRX4P78413 519 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 CYCSP99999 105 aaKnown RBP2.84□□□□□ -1.95
TARDBP-208ENST00000477447 SRSF9Q13242 221 aaKnown RBP eCLIP2.84□□□□□ -1.95
TARDBP-208ENST00000477447 TRA2AQ13595 282 aaKnown RBP eCLIP2.84□□□□□ -1.95
TARDBP-208ENST00000477447 SCARB2Q14108 478 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 NECTIN1Q15223 517 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 TWISTNBQ3B726 338 aaPredicted RBP2.84□□□□□ -1.95
TARDBP-208ENST00000477447 CASC4Q6P4E1 433 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 PRSS55Q6UWB4 352 aaPredicted RBP2.84□□□□□ -1.95
TARDBP-208ENST00000477447 KIF6Q6ZMV9 814 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 GLRX5Q86SX6 157 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 PRUNE1Q86TP1 453 aa2.84□□□□□ -1.95
TARDBP-208ENST00000477447 LRRTM1Q86UE6 522 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms