RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 OR10A6Q8NH74 314 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 GTF3C2Q8WUA4 911 aaPredicted RBP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 SFT2D1Q8WV19 159 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 C1QTNF6Q9BXI9 259 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 SLC22A11Q9NSA0 550 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 KRT33AO76009 404 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 LY86O95711 162 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 C4BP0C0L5 1744 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 RNF224P0DH78 156 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 MLNP12872 115 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 LIPAP38571 399 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 RBP5P82980 135 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 ST3GAL4Q11206 333 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 ASAH1Q13510 395 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 SGCAQ16586 387 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 MAPKAPK3Q16644 382 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 UGCGQ16739 394 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF691Q5VV52 312 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 NAPEPLDQ6IQ20 393 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 ARMC6Q6NXE6 501 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 MSANTD2Q6P1R3 559 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 TMEM88Q6PEY1 159 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 SCIMPQ6UWF3 145 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 PTCHD4Q6ZW05 846 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 FAM124AQ86V42 546 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 FAM110BQ8TC76 370 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 TMEM203Q969S6 136 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 SMAD5Q99717 465 aaKnown RBP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 RHOJQ9H4E5 214 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 AKTIPQ9H8T0 292 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 CDHR5Q9HBB8 845 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 GBA2Q9HCG7 927 aaPredicted RBP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 TMEM138Q9NPI0 162 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 DMAC2Q9NW81 257 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 LYARQ9NX58 379 aaKnown RBP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 CPA4Q9UI42 421 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 FBXL2Q9UKC9 423 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 A0A0A0MRY4 1105 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 OGTO15294 1046 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 SCELO95171 688 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 STSP08842 583 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 HOXB6P17509 224 aaKnown RBP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 PAICSP22234 425 aaKnown RBP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 LTB4RQ15722 352 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 SMN1Q16637 294 aaKnown RBP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 FCRLBQ6BAA4 426 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 SH2D5Q6ZV89 423 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 KDELC2Q7Z4H8 507 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 B3GNT8Q7Z7M8 397 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 RNF130Q86XS8 419 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 FOXRED2Q8IWF2 684 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 LAX1Q8IWV1 398 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 FAM217AQ8IXS0 508 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 OR5T3Q8NGG3 340 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 OR6B3Q8NGW1 331 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 TRMT10AQ8TBZ6 339 aaKnown RBP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 CHAC2Q8WUX2 184 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 NSMAFQ92636 917 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 YIPF6Q96EC8 236 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 SPATA13Q96N96 652 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 ZCCHC2Q9C0B9 1178 aaKnown RBP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 KLHL1Q9NR64 748 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 TNPO3Q9Y5L0 923 aaKnown RBP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 UBIAD1Q9Y5Z9 338 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 A0A087WZ62 844 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 A0A087X1B8 175 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 CXCR6O00574 342 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 NDUFA2O43678 99 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 MRPS14O60783 128 aaKnown RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 MITFO75030 526 aaPredicted RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 SLC43A1O75387 559 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 PMPCBO75439 489 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 TRUB2O95900 331 aaKnown RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 NR2F6P10588 404 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 PTX3P26022 381 aaPredicted RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 PSMB4P28070 264 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 KCNQ1P51787 676 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 CXCR4P61073 352 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 BLOC1S1P78537 153 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF91Q05481 1191 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 KCNA10Q16322 511 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 CRTC2Q53ET0 693 aaPredicted RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 SLC35F1Q5T1Q4 408 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 IRAK1BP1Q5VVH5 260 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 RAB12Q6IQ22 244 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 PAPD4Q6PIY7 484 aaKnown RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 USP51Q70EK9 711 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 NLRC3Q7RTR2 1065 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 TSPAN33Q86UF1 283 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 TMC8Q8IU68 726 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 RASGRP3Q8IV61 690 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 SLITRK4Q8IW52 837 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 DNAJC5GQ8N7S2 189 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 AVL9Q8NBF6 648 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 ZMIZ2Q8NF64 920 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 C3orf49Q96BT1 292 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 ARMC5Q96C12 935 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 C12orf66Q96MD2 445 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 KCTD7Q96MP8 289 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms