RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 DLX3O60479 287 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 CBLP22681 906 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 TMEM44Q2T9K0 475 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 PDSS1Q5T2R2 415 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 Q6ZVL8 140 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 CEP97Q8IW35 865 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 TAS2R7Q9NYW3 318 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 RPL36Q9Y3U8 105 aaKnown RBP16.78■□□□□ 0.28
SHANK1-201ENST00000293441 RPLP0P05388 317 aaKnown RBP16.78■□□□□ 0.28
SHANK1-201ENST00000293441 H1F0P07305 194 aaKnown RBP16.78■□□□□ 0.28
SHANK1-201ENST00000293441 OR52B2Q96RD2 323 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 GPR174Q9BXC1 333 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 POLR2J2Q9GZM3 115 aaKnown RBP16.78■□□□□ 0.28
SHANK1-201ENST00000293441 XKR8Q9H6D3 395 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 TMA7Q9Y2S6 64 aaKnown RBP16.78■□□□□ 0.28
SHANK1-201ENST00000293441 PCDHGA3Q9Y5H0 932 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 HEPACAM2A8MVW5 462 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 GP1BBP13224 206 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 ADAM8P78325 824 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 SNTA1Q13424 505 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 ZFP3Q96NJ6 502 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 KCNA7Q96RP8 456 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 CD244Q9BZW8 370 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 NKX2-4Q9H2Z4 354 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 TMED5Q9Y3A6 229 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 STC1P52823 247 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 PSKH2Q96QS6 385 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 GFM1Q96RP9 751 aaKnown RBP16.78■□□□□ 0.28
SHANK1-201ENST00000293441 ZIM2Q9NZV7 527 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 STOML2Q9UJZ1 356 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 TELO2Q9Y4R8 837 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 NALCNQ8IZF0 1738 aa16.78■□□□□ 0.28
SHANK1-201ENST00000293441 A0A1W2PRG6 482 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 CDC123O75794 336 aaPredicted RBP16.77■□□□□ 0.28
SHANK1-201ENST00000293441 C6orf47O95873 294 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 HNF1BP35680 557 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 CMTR2Q8IYT2 770 aaKnown RBP16.77■□□□□ 0.28
SHANK1-201ENST00000293441 C1orf216Q8TAB5 229 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 KIAA1143Q96AT1 154 aaPredicted RBP16.77■□□□□ 0.28
SHANK1-201ENST00000293441 IL4I1Q96RQ9 567 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 ZDHHC18Q9NUE0 388 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 CH25HO95992 272 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 CSN2P05814 226 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 DNAJA1P31689 397 aaKnown RBP16.77■□□□□ 0.28
SHANK1-201ENST00000293441 ASTE1Q2TB18 679 aaPredicted RBP16.77■□□□□ 0.28
SHANK1-201ENST00000293441 DNM1P34Q6PK57 102 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 C10orf82Q8WW14 230 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 SGCDQ92629 289 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 UPB1Q9UBR1 384 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 COL1A1P02452 1464 aaPredicted RBP16.77■□□□□ 0.28
SHANK1-201ENST00000293441 C2orf78A6NCI8 922 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 FHP07954 510 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 ANXA8P13928 327 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 THEM6Q8WUY1 208 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 CGREF1Q99674 301 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 C17orf62Q9BQA9 187 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 FAM83CQ9BQN1 747 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 HSD3B7Q9H2F3 369 aa16.77■□□□□ 0.28
SHANK1-201ENST00000293441 TLR4O00206 839 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 PTNP21246 168 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 PER3P56645 1201 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 AAK1Q2M2I8 961 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 RAB43Q86YS6 212 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 YIPF7Q8N8F6 280 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 KLHL6Q8WZ60 621 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 ASPNQ9BXN1 380 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 OR8D2Q9GZM6 311 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 NSUN3Q9H649 340 aaKnown RBP16.77■□□□□ 0.27
SHANK1-201ENST00000293441 COMMD3Q9UBI1 195 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 SPIN1Q9Y657 262 aaPredicted RBP16.77■□□□□ 0.27
SHANK1-201ENST00000293441 C2orf74A8MZ97 194 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 BLOC1S5-TXNDC5H3BN57 136 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 SLC10A3P09131 477 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 OR12D2P58182 307 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 CDK6Q00534 326 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 PNLDC1Q8NA58 520 aaKnown RBP16.77■□□□□ 0.27
SHANK1-201ENST00000293441 MED28Q9H204 178 aa16.77■□□□□ 0.27
SHANK1-201ENST00000293441 BAZ2AQ9UIF9 1905 aaKnown RBP16.76■□□□□ 0.27
SHANK1-201ENST00000293441 EI24O14681 340 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 GPR32O75388 356 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 ACSL1P33121 698 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 PIK3CBP42338 1070 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 RIN1Q13671 783 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 CARTPTQ16568 116 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 NANOGNBQ7Z5D8 188 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 SMG8Q8ND04 991 aaKnown RBP16.76■□□□□ 0.27
SHANK1-201ENST00000293441 OR56A1Q8NGH5 318 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 RNGTTO60942 597 aaKnown RBP16.76■□□□□ 0.27
SHANK1-201ENST00000293441 EEFSECP57772 596 aaKnown RBP16.76■□□□□ 0.27
SHANK1-201ENST00000293441 COLEC12Q5KU26 742 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 SH3YL1Q96HL8 342 aaPredicted RBP16.76■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF641Q96N77 438 aaPredicted RBP16.76■□□□□ 0.27
SHANK1-201ENST00000293441 MRM3Q9HC36 420 aaKnown RBP16.76■□□□□ 0.27
SHANK1-201ENST00000293441 LYARQ9NX58 379 aaKnown RBP16.76■□□□□ 0.27
SHANK1-201ENST00000293441 GPR34Q9UPC5 381 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 MYADML2A6NDP7 307 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF860A6NHJ4 632 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 ARPC2O15144 300 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 HMGN1P05114 100 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 OR3A3P47888 321 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms