RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ARF5P84085 180 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 NPRL3Q12980 569 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 OPCMLQ14982 345 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 P2RY6Q15077 328 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 SGCBQ16585 318 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 ZNF718Q3SXZ3 478 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 SLC25A53Q5H9E4 307 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 LRRC38Q5VT99 294 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 KLHL10Q6JEL2 608 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 G2E3Q7L622 706 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 SMIM29Q86T20 159 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 TRPT1Q86TN4 253 aaKnown RBP4.43□□□□□ -1.7
CPNE3-213ENST00000622183 PIGZQ86VD9 579 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 RCOR2Q8IZ40 523 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 STPG4Q8N801 248 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 PIK3R3Q92569 461 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 AP2M1Q96CW1 435 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 RASL10BQ96S79 203 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 C17orf62Q9BQA9 187 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 OSBPL8Q9BZF1 889 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 C10orf88Q9H8K7 445 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 RNF121Q9H920 327 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 AKIRIN1Q9H9L7 192 aaPredicted RBP4.43□□□□□ -1.7
CPNE3-213ENST00000622183 RAVER2Q9HCJ3 691 aaKnown RBP4.43□□□□□ -1.7
CPNE3-213ENST00000622183 PDRG1Q9NUG6 133 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 KCNG2Q9UJ96 466 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 GMEB2Q9UKD1 530 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 GRID1Q9ULK0 1009 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 TNNQ9UQP3 1299 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 R4GN57 208 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 TRBV5-5A0A0J9YX44 114 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 A0A0U1RQG5 324 aaPredicted RBP4.42□□□□□ -1.7
CPNE3-213ENST00000622183 FAM149AA5PLN7 773 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 H0YIG0 161 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 PGRMC2O15173 223 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 HTATSF1O43719 755 aaKnown RBP4.42□□□□□ -1.7
CPNE3-213ENST00000622183 CIDEAO60543 219 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 CDK2AP2O75956 126 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 CAVIN2O95810 425 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 EDN1P05305 212 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 KRT3P12035 628 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 ALDH1B1P30837 517 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 DUTP33316 252 aaKnown RBP4.42□□□□□ -1.7
CPNE3-213ENST00000622183 DLX5P56178 289 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 SQLEQ14534 574 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 SLC35E4Q6ICL7 350 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 CPEB2Q7Z5Q1 589 aaKnown RBP4.42□□□□□ -1.7
CPNE3-213ENST00000622183 PRUNE1Q86TP1 453 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 CROCCP3Q8IVE0 287 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 CNTN4Q8IWV2 1026 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 KIRREL3Q8IZU9 778 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 PRSS35Q8N3Z0 413 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 SFRP1Q8N474 314 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 MARVELD2Q8N4S9 558 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 METTL21AQ8WXB1 218 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 CCDC47Q96A33 483 aaKnown RBP4.42□□□□□ -1.7
CPNE3-213ENST00000622183 SENP5Q96HI0 755 aaPredicted RBP4.42□□□□□ -1.7
CPNE3-213ENST00000622183 BTBD9Q96Q07 612 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 CDCA3Q99618 268 aaPredicted RBP4.42□□□□□ -1.7
CPNE3-213ENST00000622183 PI4K2AQ9BTU6 479 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 SIX2Q9NPC8 291 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 MRPL17Q9NRX2 175 aaKnown RBP4.42□□□□□ -1.7
CPNE3-213ENST00000622183 DNAJC11Q9NVH1 559 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 COMMD8Q9NX08 183 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 C19orf25Q9UFG5 118 aaPredicted RBP4.42□□□□□ -1.7
CPNE3-213ENST00000622183 AGTPBP1Q9UPW5 1226 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 PFASO15067 1338 aa4.42□□□□□ -1.7
CPNE3-213ENST00000622183 A0A087X0K7 114 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 BICDL2A1A5D9 508 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 BMPR1BO00238 502 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 ZNF197O14709 1029 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 SCO2O43819 266 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 ZBTB14O43829 449 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 KRT33AO76009 404 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 GPIP06744 558 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 YES1P07947 543 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 HMOX1P09601 288 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 MAGEB1P43366 347 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 SERPINH1P50454 418 aaKnown RBP4.41□□□□□ -1.7
CPNE3-213ENST00000622183 CDR2Q01850 454 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 CETN1Q12798 172 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 CBX3Q13185 183 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 RBBP5Q15291 538 aaKnown RBP4.41□□□□□ -1.7
CPNE3-213ENST00000622183 HFEQ30201 348 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 LCN1P1Q5VSP4 162 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 PRAMEF8Q5VWM4 474 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 KCTD11Q693B1 232 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 PM20D1Q6GTS8 502 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 TATDN1Q6P1N9 297 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 SLC16A9Q7RTY1 509 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 PRSS42Q7Z5A4 293 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 LRTM2Q8N967 370 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 KBTBD8Q8NFY9 601 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 OR8H1Q8NGG4 311 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 HPSE2Q8WWQ2 592 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 C5orf30Q96GV9 206 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 RBM41Q96IZ5 413 aaKnown RBP4.41□□□□□ -1.7
CPNE3-213ENST00000622183 ZNF559Q9BR84 538 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 ALKBH7Q9BT30 221 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms