RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 SSMEM1Q8WWF3 244 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 SLC44A1Q8WWI5 657 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 DNAAF4Q8WXU2 420 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 DVL3Q92997 716 aaPredicted RBP4.94□□□□□ -1.62
SND1-216ENST00000492840 NSMCE2Q96MF7 247 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 MYADMQ96S97 322 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 RAD9AQ99638 391 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 KXD1Q9BQD3 176 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 ZNF559Q9BR84 538 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 ACPTQ9BZG2 426 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 ISCUQ9H1K1 167 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 SOHLH2Q9NX45 425 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 AATFQ9NY61 560 aaKnown RBP eCLIP4.94□□□□□ -1.62
SND1-216ENST00000492840 NPAP1Q9NZP6 1156 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 MSRB1Q9NZV6 116 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 ZNF624Q9P2J8 865 aaPredicted RBP4.94□□□□□ -1.62
SND1-216ENST00000492840 EXTL2Q9UBQ6 330 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 KCNN3Q9UGI6 736 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 TSPAN16Q9UKR8 245 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 PLEKHA6Q9Y2H5 1048 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 SRPRBQ9Y5M8 271 aaKnown RBP4.94□□□□□ -1.62
SND1-216ENST00000492840 PRUNE2Q8WUY3 3088 aa4.94□□□□□ -1.62
SND1-216ENST00000492840 MED23Q9ULK4 1368 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 GAGE12JA6NER3 117 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 TLX3O43711 291 aaPredicted RBP4.93□□□□□ -1.62
SND1-216ENST00000492840 NDUFS7O75251 213 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 RAD51DO75771 328 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 VNN2O95498 520 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 TPBGLP0DKB5 382 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 CTSAP10619 480 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 SKILP12757 684 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 MYL6BP14649 208 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 CCND2P30279 289 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 STX2P32856 288 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 MDH1P40925 334 aaKnown RBP4.93□□□□□ -1.62
SND1-216ENST00000492840 IFNAR2P48551 515 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 NUDT6P53370 316 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 SRP54P61011 504 aaKnown RBP4.93□□□□□ -1.62
SND1-216ENST00000492840 MAT1AQ00266 395 aaKnown RBP4.93□□□□□ -1.62
SND1-216ENST00000492840 VGLL4Q14135 290 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 CTTNQ14247 550 aaKnown RBP4.93□□□□□ -1.62
SND1-216ENST00000492840 CEBPEQ15744 281 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 NPTX1Q15818 432 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 CTF1Q16619 201 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 LRRC26Q2I0M4 334 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 CCDC40Q4G0X9 1142 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 TMEM119Q4V9L6 283 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 TAF1BQ53T94 588 aaPredicted RBP4.93□□□□□ -1.62
SND1-216ENST00000492840 HSP90AB3PQ58FF7 597 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 C9orf50Q5SZB4 431 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 GRTP1Q5TC63 336 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 OR6B2Q6IFH4 312 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 WDR88Q6ZMY6 472 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 RGS9BPQ6ZS82 235 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 LCNL1Q6ZST4 164 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 Q75L30 129 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 MON1BQ7L1V2 547 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 SYVN1Q86TM6 617 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 FAM114A1Q8IWE2 563 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 CFAP206Q8IYR0 622 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 Q8N3U1 123 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 L3MBTL4Q8NA19 623 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 KIAA0895Q8NCT3 520 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 TMEM185AQ8NFB2 350 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 RAB7BQ96AH8 199 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 MTERF3Q96E29 417 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 DTNBP1Q96EV8 351 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 APOLD1Q96LR9 279 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 SLC2A11Q9BYW1 496 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 CCSER1Q9C0I3 900 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 CATSPERBQ9H7T0 1116 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 GPN1Q9HCN4 374 aaPredicted RBP4.93□□□□□ -1.62
SND1-216ENST00000492840 RAB9BQ9NP90 201 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 SMPD4Q9NXE4 827 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 UBQLN2Q9UHD9 624 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 DNPEPQ9ULA0 475 aa4.93□□□□□ -1.62
SND1-216ENST00000492840 SPTBN4Q9H254 2564 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 EPG5Q9HCE0 2579 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 FAM149AA5PLN7 773 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 HSF2BPO75031 334 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 PRDM1O75626 825 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 IFNA2P01563 188 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 ADRB1P08588 477 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 HSPA5P11021 654 aaKnown RBP4.92□□□□□ -1.62
SND1-216ENST00000492840 KRT13P13646 458 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 PIK3R1P27986 724 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 CLDN15P56746 228 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 TFF2Q03403 129 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 ELP6Q0PNE2 266 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 PPIL2Q13356 520 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 FOXE3Q13461 319 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 TRIM29Q14134 588 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 STXBP2Q15833 593 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 MAJINQ3KP22 176 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 SYT14P1Q58G82 188 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 MIIPQ5JXC2 388 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 PAPPA-AS1Q5QFB9 102 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 CCNYL2Q5T2Q4 361 aa4.92□□□□□ -1.62
SND1-216ENST00000492840 DEF8Q6ZN54 512 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms