RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 SPATA4Q8NEY3 305 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 OR11G2Q8NGC1 345 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 RERGQ96A58 199 aaPredicted RBP17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 PNPLA2Q96AD5 504 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 MIEF2Q96C03 454 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 CDC14AQ9UNH5 594 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 MRPS2Q9Y399 296 aaKnown RBP17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 MAP4K5Q9Y4K4 846 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 PRRC2CQ9Y520 2896 aaKnown RBP17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 LRRK2Q5S007 2527 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 FAM187AA6NFU0 413 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 TTLL8A6PVC2 850 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 ALOX12BO75342 701 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 NPPBP16860 134 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 CCND1P24385 295 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 OCA2Q04671 838 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 SRSF1Q07955 248 aaKnown RBP eCLIP17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 NAE1Q13564 534 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 ATG9BQ674R7 924 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 SBSNQ6UWP8 590 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 SLC26A11Q86WA9 606 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 C17orf53Q8N3J3 647 aaPredicted RBP17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 BBOF1Q8ND07 529 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 OR56A3Q8NH54 315 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 CPT1CQ8TCG5 803 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 TM4SF19Q96DZ7 209 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 ERP44Q9BS26 406 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 CRB3Q9BUF7 120 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 MFRPQ9BY79 579 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 TGIF2Q9GZN2 237 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 ZBTB20Q9HC78 741 aaPredicted RBP17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 SMYD2Q9NRG4 433 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 WHRNQ9P202 907 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 ZFATQ9P243 1243 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 HECTD1Q9ULT8 2610 aa17.98■□□□□ 0.47
HMGB3P22-201ENST00000442010 COL12A1Q99715 3063 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 CPAMD8Q8IZJ3 1885 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 HIVEP3Q5T1R4 2406 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 NDC80O14777 642 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 RAD51CO43502 376 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 KLHL41O60662 606 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 HIST1H2AGP0C0S8 130 aaPredicted RBP17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 ZNF37AP17032 561 aaPredicted RBP17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 HIST1H2ADP20671 130 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 AP1S2P56377 157 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 RPS15AP62244 130 aaKnown RBP17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 Q0VFX4 171 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 RBBP7Q16576 425 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 TUBB8Q3ZCM7 444 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 ZBED8Q8IZ13 594 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 THAP11Q96EK4 314 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 HIST1H2AHQ96KK5 128 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 OR4K3Q96R72 315 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 HIST1H2AJQ99878 128 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 H2AFJQ9BTM1 129 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 DRC3Q9H069 523 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 GRHL1Q9NZI5 618 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 C3orf18Q9UK00 162 aa17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 USP9XQ93008 2570 aaPredicted RBP17.97■□□□□ 0.47
HMGB3P22-201ENST00000442010 A0A0A6YYC8 382 aaPredicted RBP17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 A0A1W2PQ72 361 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 I3L1I5 382 aaPredicted RBP17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 FFAR3O14843 346 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 GPR42O15529 346 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 PRPF4O43172 522 aaKnown RBP eCLIP17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 LCMT2O60294 686 aaKnown RBP17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 ENO2P09104 434 aaPredicted RBP17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 ITGA3P26006 1051 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 EFNA3P52797 238 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 ETF1P62495 437 aaKnown RBP17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 PPP1R3AQ16821 1122 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 DUPD1Q68J44 220 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 CAPN13Q6MZZ7 669 aaPredicted RBP17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 STRA8Q7Z7C7 330 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 C17orf64Q86WR6 236 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 PRSS58Q8IYP2 241 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 ABHD11Q8NFV4 315 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 FBXL8Q96CD0 374 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 MMABQ96EY8 250 aaPredicted RBP17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 SARGQ9BW04 601 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 DPH5Q9H2P9 285 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 MKKSQ9NPJ1 570 aaPredicted RBP17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 C14orf105Q9NVL8 296 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 ARL15Q9NXU5 204 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 LUZP4Q9P127 313 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 TRPC4Q9UBN4 977 aa17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 NOVA2Q9UNW9 492 aaKnown RBP17.96■□□□□ 0.47
HMGB3P22-201ENST00000442010 FAM95CA0A1B0GW59 222 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 FEZF1A0PJY2 475 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 IPO13O94829 963 aaKnown RBP17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 WISP3O95389 354 aaPredicted RBP17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 STATHP02808 62 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 ALPPP05187 535 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 CDH1P12830 882 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 BCL6P41182 706 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 TAS2R39P59534 338 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 C2orf54Q08AI8 447 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 INPP5JQ15735 1006 aaPredicted RBP17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 NDUFA9Q16795 377 aa17.95■□□□□ 0.46
HMGB3P22-201ENST00000442010 SYT16Q17RD7 645 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms