RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 OR2A14Q96R47 310 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 HIST1H2AJQ99878 128 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 H2AFJQ9BTM1 129 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 RAB11FIP5Q9BXF6 653 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 CAPS2Q9BXY5 557 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 PITPNM3Q9BZ71 974 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 ABCF3Q9NUQ8 709 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 OXSMQ9NWU1 459 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 WWOXQ9NZC7 414 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 KLHL20Q9Y2M5 609 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 MRPS18BQ9Y676 258 aaKnown RBP13.26□□□□□ -0.29
TPM4-202ENST00000344824 MDC1Q14676 2089 aaKnown RBP13.26□□□□□ -0.29
TPM4-202ENST00000344824 SEC16AO15027 2179 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 TRIM13O60858 407 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 CPNE3O75131 537 aaKnown RBP13.25□□□□□ -0.29
TPM4-202ENST00000344824 IPO13O94829 963 aaKnown RBP13.25□□□□□ -0.29
TPM4-202ENST00000344824 SIX3O95343 332 aaPredicted RBP13.25□□□□□ -0.29
TPM4-202ENST00000344824 ANXA5P08758 320 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 ENO2P09104 434 aaPredicted RBP13.25□□□□□ -0.29
TPM4-202ENST00000344824 CCNYL3P0C7X3 344 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 MAGP20916 626 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 PSMB5P28074 263 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 EEF1DP29692 281 aaKnown RBP13.25□□□□□ -0.29
TPM4-202ENST00000344824 KIR2DS3Q14952 304 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 PDK4Q16654 411 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 RPS27LQ71UM5 84 aaKnown RBP13.25□□□□□ -0.29
TPM4-202ENST00000344824 SLC22A9Q8IVM8 553 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 OR2L8Q8NGY9 312 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 OR1L3Q8NH93 324 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 MAGEC3Q8TD91 643 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 ZNF75CPQ92670 426 aaPredicted RBP13.25□□□□□ -0.29
TPM4-202ENST00000344824 CLIP3Q96DZ5 547 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 TMEM237Q96Q45 408 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 PKP4Q99569 1192 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 ARHGAP9Q9BRR9 750 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 IL17BQ9UHF5 180 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 CROTQ9UKG9 612 aa13.25□□□□□ -0.29
TPM4-202ENST00000344824 SMG1Q96Q15 3661 aaKnown RBP13.25□□□□□ -0.29
TPM4-202ENST00000344824 CCDC189A1A4V9 331 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 ZNF891A8MT65 544 aaPredicted RBP13.24□□□□□ -0.29
TPM4-202ENST00000344824 CCR10P46092 362 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 HSPA7P48741 367 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 PRKAA2P54646 552 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 NAGLUP54802 743 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 CBX1P83916 185 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 MAP7Q14244 749 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 GRB7Q14451 532 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 SLC5A12Q1EHB4 618 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 SOWAHCQ53LP3 525 aaPredicted RBP13.24□□□□□ -0.29
TPM4-202ENST00000344824 CFAP157Q5JU67 520 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 TRIM42Q8IWZ5 723 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 GPR135Q8IZ08 494 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 PDPRQ8NCN5 879 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 CT55Q8WUE5 264 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 STARD8Q92502 1023 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 EXTL1Q92935 676 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 MR1Q95460 341 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 CCDC126Q96EE4 140 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 MAGEB18Q96M61 343 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 EFHD1Q9BUP0 239 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 GATA5Q9BWX5 397 aaPredicted RBP13.24□□□□□ -0.29
TPM4-202ENST00000344824 SPRY4Q9C004 299 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 MANSC1Q9H8J5 431 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 LHX9Q9NQ69 397 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 ADAM21Q9UKJ8 722 aa13.24□□□□□ -0.29
TPM4-202ENST00000344824 TCP11X1B4DZS4 312 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 E7EQ34 232 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 ERVH48-1M5A8F1 160 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 CCNT2O60583 730 aaKnown RBP13.23□□□□□ -0.29
TPM4-202ENST00000344824 PRB1P04280 392 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 TSPAN8P19075 237 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 ALDH18A1P54886 795 aaKnown RBP13.23□□□□□ -0.29
TPM4-202ENST00000344824 ITGA1P56199 1179 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 ASPHQ12797 758 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 STX3Q13277 289 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 LY6DQ14210 128 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 SETDB1Q15047 1291 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 SF1Q15637 639 aaKnown RBP13.23□□□□□ -0.29
TPM4-202ENST00000344824 ZIC1Q15915 447 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 CES4AQ5XG92 561 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 SULT1C3Q6IMI6 304 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 FAM199XQ6PEV8 388 aaPredicted RBP13.23□□□□□ -0.29
TPM4-202ENST00000344824 BPHLQ86WA6 291 aaPredicted RBP13.23□□□□□ -0.29
TPM4-202ENST00000344824 PPFIBP2Q8ND30 876 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 OR9A1PQ8NGU1 263 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 OR8K5Q8NH50 307 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 PPP4R1Q8TF05 950 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 SLC22A18Q96BI1 424 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 RHBDF1Q96CC6 855 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 MIPEPQ99797 713 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 TMEM79Q9BSE2 394 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 MENTQ9BUN1 341 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 ACAT2Q9BWD1 397 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 ATG10Q9H0Y0 220 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 ZNF395Q9H8N7 513 aaPredicted RBP13.23□□□□□ -0.29
TPM4-202ENST00000344824 ACTR5Q9H9F9 607 aaPredicted RBP13.23□□□□□ -0.29
TPM4-202ENST00000344824 FAM60AQ9NP50 221 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 SPATA7Q9P0W8 599 aa13.23□□□□□ -0.29
TPM4-202ENST00000344824 SERTAD3Q9UJW9 196 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms