RNA–Protein interactions for RNA: ENST00000579399.1

KSR1-209, Transcript of kinase suppressor of ras 1, humanhuman

TSL 3

Gene KSR1, Length 948 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KSR1-209ENST00000579399 MTHFD2P13995 350 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 KRT4P19013 534 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 F8A1P23610 371 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 CRHR1P34998 444 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 GGT5P36269 586 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 CCT5P48643 541 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 TBR1Q16650 682 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 SLC5A12Q1EHB4 618 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 PRAMEF17Q5VTA0 474 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 CDHR3Q6ZTQ4 885 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 KLHDC8AQ8IYD2 350 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 TCAIMQ8N3R3 496 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 PPFIBP2Q8ND30 876 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 OR8K5Q8NH50 307 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 OR56A3Q8NH54 315 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 EGFL8Q99944 293 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 MRPL57Q9BQC6 102 aaKnown RBP12.86□□□□□ -0.35
KSR1-209ENST00000579399 ARHGAP9Q9BRR9 750 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 SGPP1Q9BX95 441 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 SEMA4CQ9C0C4 833 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 ATG10Q9H0Y0 220 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 VIPAS39Q9H9C1 493 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 AKIRIN1Q9H9L7 192 aaPredicted RBP12.86□□□□□ -0.35
KSR1-209ENST00000579399 FANCEQ9HB96 536 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 LHX9Q9NQ69 397 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 MKS1Q9NXB0 559 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 NUDT4Q9NZJ9 180 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 TMEM216Q9P0N5 145 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 SENP1Q9P0U3 644 aa12.86□□□□□ -0.35
KSR1-209ENST00000579399 PTBP2Q9UKA9 531 aaKnown RBP12.86□□□□□ -0.35
KSR1-209ENST00000579399 A0A0J9YY10 115 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 AGPSO00116 658 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 UBXN8O00124 270 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 TAPBPO15533 448 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 KATNA1O75449 491 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 C1QL1O75973 258 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 ITGB2P05107 769 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 SBK3P0C264 359 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 TCN2P20062 427 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 CCND1P24385 295 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 NAE1Q13564 534 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 C16orf46Q6P387 395 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 FAM199XQ6PEV8 388 aaPredicted RBP12.85□□□□□ -0.35
KSR1-209ENST00000579399 SUSD1Q6UWL2 747 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 TAX1BP1Q86VP1 789 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 FAM20CQ8IXL6 584 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 SRRM1Q8IYB3 904 aaKnown RBP12.85□□□□□ -0.35
KSR1-209ENST00000579399 EXD3Q8N9H8 876 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 BANPQ8N9N5 519 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 OR1L3Q8NH93 324 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 CT55Q8WUE5 264 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 STARD8Q92502 1023 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 ALKBH8Q96BT7 664 aaKnown RBP12.85□□□□□ -0.35
KSR1-209ENST00000579399 SCYL1Q96KG9 808 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 PCBD2Q9H0N5 130 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 MRPL46Q9H2W6 279 aaKnown RBP12.85□□□□□ -0.35
KSR1-209ENST00000579399 FAM60AQ9NP50 221 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 CCDC177Q9NQR7 707 aaPredicted RBP12.85□□□□□ -0.35
KSR1-209ENST00000579399 INTS7Q9NVH2 962 aaKnown RBP12.85□□□□□ -0.35
KSR1-209ENST00000579399 CD274Q9NZQ7 290 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 XPR1Q9UBH6 696 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 GRID1Q9ULK0 1009 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 TMCO1Q9UM00 188 aa12.85□□□□□ -0.35
KSR1-209ENST00000579399 SMG1Q96Q15 3661 aaKnown RBP12.85□□□□□ -0.35
KSR1-209ENST00000579399 NCF1BA6NI72 391 aaPredicted RBP12.84□□□□□ -0.35
KSR1-209ENST00000579399 NCF1CA8MVU1 366 aaPredicted RBP12.84□□□□□ -0.35
KSR1-209ENST00000579399 SUPT3HB4E1H0 165 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 COPEO14579 308 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 CPNE3O75131 537 aaKnown RBP12.84□□□□□ -0.35
KSR1-209ENST00000579399 SUPT3HO75486 399 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 IPO13O94829 963 aaKnown RBP12.84□□□□□ -0.35
KSR1-209ENST00000579399 S100BP04271 92 aaPredicted RBP12.84□□□□□ -0.35
KSR1-209ENST00000579399 MYZAPP0CAP1 466 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 NCF1P14598 390 aaPredicted RBP12.84□□□□□ -0.35
KSR1-209ENST00000579399 NPPBP16860 134 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 PSMB5P28074 263 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 RPA3P35244 121 aaPredicted RBP12.84□□□□□ -0.35
KSR1-209ENST00000579399 SLC6A12P48065 614 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 TBPL1P62380 186 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 PRDX1Q06830 199 aaKnown RBP12.84□□□□□ -0.35
KSR1-209ENST00000579399 DNASE1L3Q13609 305 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 SF1Q15637 639 aaKnown RBP12.84□□□□□ -0.35
KSR1-209ENST00000579399 ZIC1Q15915 447 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 PTCHD3Q3KNS1 767 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 ATP1A1-AS1Q5TC04 95 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 CAPN13Q6MZZ7 669 aaPredicted RBP12.84□□□□□ -0.35
KSR1-209ENST00000579399 LCTLQ6UWM7 567 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 EXOC3L1Q86VI1 746 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 C4orf33Q8N1A6 199 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 C19orf47Q8N9M1 422 aaKnown RBP12.84□□□□□ -0.35
KSR1-209ENST00000579399 SLC38A9Q8NBW4 561 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 OR2L3Q8NG85 312 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 N4BP2L2Q92802 583 aaPredicted RBP12.84□□□□□ -0.35
KSR1-209ENST00000579399 ZUFSPQ96AP4 578 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 PKNOX2Q96KN3 472 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 RUFY1Q96T51 708 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 MIPEPQ99797 713 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 TMEM79Q9BSE2 394 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 CHRNA10Q9GZZ6 450 aa12.84□□□□□ -0.35
KSR1-209ENST00000579399 TMBIM4Q9HC24 238 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms