RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ATP5IP56385 69 aaPredicted RBP3.23□□□□□ -1.89
PRPF4-203ENST00000488937 GSDMDP57764 484 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 EIF3EP60228 445 aaKnown RBP3.23□□□□□ -1.89
PRPF4-203ENST00000488937 HAND2P61296 217 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 DSC1Q08554 894 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 FAM27E3Q08E93 113 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 DOC2AQ14183 400 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 PDK3Q15120 406 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 PTGISQ16647 500 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 MEP1AQ16819 746 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 SYT16Q17RD7 645 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 CCDC57Q2TAC2 916 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 CTU2Q2VPK5 515 aaKnown RBP3.23□□□□□ -1.89
PRPF4-203ENST00000488937 KRT71Q3SY84 523 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 USH1GQ495M9 461 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 LACTB2Q53H82 288 aaPredicted RBP3.23□□□□□ -1.89
PRPF4-203ENST00000488937 FBXO48Q5FWF7 155 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 LDLRAP1Q5SW96 308 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 SIGIRRQ6IA17 410 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 MFSD12Q6NUT3 480 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 MIS18BP1Q6P0N0 1132 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 METTL2BQ6P1Q9 378 aaKnown RBP3.23□□□□□ -1.89
PRPF4-203ENST00000488937 FAM159AQ6UWV7 190 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 B3GNT6Q6ZMB0 384 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 SERPINA11Q86U17 422 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 BIVMQ86UB2 503 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 CCDC190Q86UF4 302 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 ANKRD46Q86W74 232 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 NRROSQ86YC3 692 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 PHC2Q8IXK0 858 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 SPATA6LQ8N4H0 392 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 FAM184AQ8NB25 1140 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 SIDT2Q8NBJ9 832 aaKnown RBP3.23□□□□□ -1.89
PRPF4-203ENST00000488937 OR8K3Q8NH51 312 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 SAP25Q8TEE9 199 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 WBP2Q969T9 261 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 ORAI1Q96D31 301 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 METTL2AQ96IZ6 378 aaKnown RBP3.23□□□□□ -1.89
PRPF4-203ENST00000488937 THOC3Q96J01 351 aaKnown RBP3.23□□□□□ -1.89
PRPF4-203ENST00000488937 PRMT6Q96LA8 375 aaPredicted RBP3.23□□□□□ -1.89
PRPF4-203ENST00000488937 SFXN2Q96NB2 322 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 COQ7Q99807 217 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 C17orf62Q9BQA9 187 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 RAD21L1Q9H4I0 556 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 XKR8Q9H6D3 395 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 ACTR8Q9H981 624 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 Q9N2K0 584 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 FAM207AQ9NSI2 230 aaPredicted RBP3.23□□□□□ -1.89
PRPF4-203ENST00000488937 SERTAD4Q9NUC0 356 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 RHCGQ9UBD6 479 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 ZNF510Q9Y2H8 683 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 PLEKHG2Q9H7P9 1386 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 DISP3Q9P2K9 1392 aa3.23□□□□□ -1.89
PRPF4-203ENST00000488937 SF3B1O75533 1304 aaKnown RBP eCLIP3.22□□□□□ -1.89
PRPF4-203ENST00000488937 PHLPP2Q6ZVD8 1323 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.22□□□□□ -1.89
PRPF4-203ENST00000488937 GSAPA4D1B5 854 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 MBLAC1A4D2B0 266 aaPredicted RBP3.22□□□□□ -1.89
PRPF4-203ENST00000488937 OR52A4PA6NMU1 304 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 H0YIZ8 118 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 NDUFS8O00217 210 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 RRHO14718 337 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 ECE2O60344 883 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 ATP6AP2O75787 350 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 CIB2O75838 187 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 SERPINA3P01011 423 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 IGHV2-70P01814 119 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 LCKP06239 509 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 TPM1P09493 284 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 NPSP0C0P6 89 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 CYP2D6P10635 497 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 ITGAMP11215 1152 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 KRT3P12035 628 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 ENGP17813 658 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 CPN2P22792 545 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 ITGA3P26006 1051 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 PTBP1P26599 531 aaKnown RBP eCLIP3.22□□□□□ -1.892e-14■■■■■ 31.7
PRPF4-203ENST00000488937 FCGR2BP31994 310 aaPredicted RBP3.22□□□□□ -1.89
PRPF4-203ENST00000488937 PTGER4P35408 488 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 MPLP40238 635 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 RPL21P46778 160 aaKnown RBP3.22□□□□□ -1.89
PRPF4-203ENST00000488937 FMO5P49326 533 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 ALDH7A1P49419 539 aaKnown RBP3.22□□□□□ -1.89
PRPF4-203ENST00000488937 SUCLG1P53597 346 aaKnown RBP3.22□□□□□ -1.89
PRPF4-203ENST00000488937 MAPK12P53778 367 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 SSTP61278 116 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 RPS8P62241 208 aaKnown RBP3.22□□□□□ -1.89
PRPF4-203ENST00000488937 SNRPEP62304 92 aaKnown RBP3.22□□□□□ -1.89
PRPF4-203ENST00000488937 IRX4P78413 519 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 MAT1AQ00266 395 aaKnown RBP3.22□□□□□ -1.89
PRPF4-203ENST00000488937 SLC34A1Q06495 639 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 TROAPQ12815 778 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 FOXI1Q12951 378 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 SRSF5Q13243 272 aaKnown RBP3.22□□□□□ -1.89
PRPF4-203ENST00000488937 CUL3Q13618 768 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 NEDD9Q14511 834 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 SQLEQ14534 574 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 TXNRD1Q16881 649 aa3.22□□□□□ -1.89
PRPF4-203ENST00000488937 CERKLQ49MI3 558 aaPredicted RBP3.22□□□□□ -1.89
PRPF4-203ENST00000488937 DCST1Q5T197 706 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms