RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 hCG_2014768A0A024R1R8 64 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 M0QX08 132 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 SLC1A7O00341 560 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 BCL10O95999 233 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 ITPKAP23677 461 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 CDKN2CP42773 168 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 TMED1Q13445 227 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 PRSS36Q5K4E3 855 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 ANKRD34AQ69YU3 496 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 ERAP2Q6P179 960 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 ERICH5Q6P6B1 374 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 NAT16Q8N8M0 369 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 FKBP10Q96AY3 582 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 TMEM159Q96B96 161 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 APIPQ96GX9 242 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 THG1LQ9NWX6 298 aaKnown RBP25.28■■□□□ 1.64
HLA-C-208ENST00000487245 GPRC5BQ9NZH0 403 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 RFXANKO14593 260 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 ATG13O75143 517 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 CATP04040 527 aaKnown RBP25.28■■□□□ 1.64
HLA-C-208ENST00000487245 SEMG1P04279 462 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 CTNNB1P35222 781 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 KIR3DL1P43629 444 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 SRSF11Q05519 484 aaKnown RBP25.28■■□□□ 1.64
HLA-C-208ENST00000487245 PCDH1Q08174 1060 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 DUOXA1Q1HG43 343 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 PGS1Q32NB8 556 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 NOXRED1Q6NXP6 359 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 ZDHHC21Q8IVQ6 265 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 CPA6Q8N4T0 437 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 SMYD1Q8NB12 490 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 SP7Q8TDD2 431 aaPredicted RBP25.28■■□□□ 1.64
HLA-C-208ENST00000487245 GLYATL1Q969I3 302 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 RAD9AQ99638 391 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 BCL7BQ9BQE9 202 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 ATG10Q9H0Y0 220 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 TM9SF3Q9HD45 589 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 SNX5Q9Y5X3 404 aa25.28■■□□□ 1.64
HLA-C-208ENST00000487245 DOCK6Q96HP0 2047 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 FADS2P1A8MWK0 482 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 EVPLLA8MZ36 301 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 PSMD11O00231 422 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 ZNF197O14709 1029 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 PRAMEF4O60810 478 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 UGT2B11O75310 529 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 GSNP06396 782 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 MYCLP1P12525 358 aaPredicted RBP25.27■■□□□ 1.64
HLA-C-208ENST00000487245 HSD3B1P14060 373 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 HSD3B2P26439 372 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 BNIP3Q12983 259 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 PRAMEF9Q5VWM5 478 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 ZNF551Q7Z340 670 aaPredicted RBP25.27■■□□□ 1.64
HLA-C-208ENST00000487245 GPR155Q7Z3F1 870 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 THOC6Q86W42 341 aaKnown RBP25.27■■□□□ 1.64
HLA-C-208ENST00000487245 ZC3H7AQ8IWR0 971 aaKnown RBP25.27■■□□□ 1.64
HLA-C-208ENST00000487245 SETD9Q8NE22 299 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 POF1BQ8WVV4 589 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 CCM2Q9BSQ5 444 aa25.27■■□□□ 1.64
HLA-C-208ENST00000487245 CTSLP07711 333 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 ZNF12P17014 697 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 ZNF182P17025 639 aaPredicted RBP25.26■■□□□ 1.63
HLA-C-208ENST00000487245 PCMT1P22061 227 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 HNF4AP41235 474 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 DOK6Q6PKX4 331 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 KIAA1958Q8N8K9 716 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 SPPL3Q8TCT6 385 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 SORCS1Q8WY21 1168 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 SGCDQ92629 289 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 APOLD1Q96LR9 279 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 LTB4R2Q9NPC1 389 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 IL1RAPQ9NPH3 570 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 VNN3Q9NY84 501 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 OR2AG2A6NM03 316 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 ARHGEF33A8MVX0 844 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 BCKDKO14874 412 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 GPX2P18283 190 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 MMP12P39900 470 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 PRLHRP49683 370 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 C21orf59P57076 290 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 CDK5R2Q13319 367 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 PPIGQ13427 754 aaKnown RBP eCLIP25.26■■□□□ 1.63
HLA-C-208ENST00000487245 KEAP1Q14145 624 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 LIPIQ6XZB0 460 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 ANKRD46Q86W74 232 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 PIK3C3Q8NEB9 887 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 BPIFB6Q8NFQ5 453 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 MYLIPQ8WY64 445 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 STARD8Q92502 1023 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 FOPNLQ96NB1 174 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 NODALQ96S42 347 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 CSF3RQ99062 836 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 AASDHPPTQ9NRN7 309 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 RPS6KA6Q9UK32 745 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 MAPRE3Q9UPY8 281 aa25.26■■□□□ 1.63
HLA-C-208ENST00000487245 RUVBL1Q9Y265 456 aaKnown RBP25.26■■□□□ 1.63
HLA-C-208ENST00000487245 ELFN1P0C7U0 828 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 PRKACGP22612 351 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 DGKGP49619 791 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 ST8SIA6P61647 398 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 UBE3AQ05086 875 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms