RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 IFNAR1P17181 557 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 HOXC8P31273 242 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 CSTF2P33240 577 aaKnown RBP eCLIP3.46□□□□□ -1.86
CBX3-207ENST00000481300 TUBB4BP68371 445 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 DLK1P80370 383 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 SCN1BQ07699 218 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 TAF10Q12962 218 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 GTDC1Q4AE62 458 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 LRRC73Q5JTD7 316 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 C6orf136Q5SQH8 315 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 CAVIN1Q6NZI2 390 aaKnown RBP3.46□□□□□ -1.86
CBX3-207ENST00000481300 TRAT1Q6PIZ9 186 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 MEX3BQ6ZN04 569 aaKnown RBP3.46□□□□□ -1.86
CBX3-207ENST00000481300 DNAJB7Q7Z6W7 309 aaPredicted RBP3.46□□□□□ -1.86
CBX3-207ENST00000481300 RASGEF1AQ8N9B8 481 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 NOA1Q8NC60 698 aaKnown RBP3.46□□□□□ -1.86
CBX3-207ENST00000481300 OR13C3Q8NGS6 347 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 DEPDC1BQ8WUY9 529 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 PIGBQ92521 554 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 FAM162AQ96A26 154 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 SENP5Q96HI0 755 aaPredicted RBP3.46□□□□□ -1.86
CBX3-207ENST00000481300 CITED2Q99967 270 aaPredicted RBP3.46□□□□□ -1.86
CBX3-207ENST00000481300 SLC2A11Q9BYW1 496 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 ZMYND12Q9H0C1 365 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 ZWILCHQ9H900 591 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 CHST11Q9NPF2 352 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 PPANQ9NQ55 473 aaKnown RBP3.46□□□□□ -1.86
CBX3-207ENST00000481300 GSN-AS1Q9NRJ2 163 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 P4HTMQ9NXG6 502 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 POMT1Q9Y6A1 747 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 PIK3R4Q99570 1358 aa3.46□□□□□ -1.86
CBX3-207ENST00000481300 GREB1LQ9C091 1923 aaPredicted RBP3.46□□□□□ -1.86
CBX3-207ENST00000481300 CLTCQ00610 1675 aaKnown RBP3.46□□□□□ -1.86
CBX3-207ENST00000481300 FAM135BQ49AJ0 1406 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 PTPRUQ92729 1446 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 SLIT1O75093 1534 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 TMEM131LA2VDJ0 1609 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 CEP152O94986 1710 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 SPHKAPQ2M3C7 1700 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 HTR3EA5X5Y0 456 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 LINC01565O15544 149 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 SNX3O60493 162 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 DFFBO76075 338 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 GSRP00390 522 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 NGFP01138 241 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 IGKV3-20P01619 116 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 SP1P08047 785 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 FRMD6-AS1P0C7T7 363 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 PRSS56P0CW18 603 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 IGHV4-31P0DP07 118 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 ERVK-10P10266 1014 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 CHRNB4P30926 498 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 PRKCIP41743 596 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 B3GALT5-AS1P59052 145 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 RBP5P82980 135 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 ILF2Q12905 390 aaKnown RBP3.45□□□□□ -1.86
CBX3-207ENST00000481300 BFSP1Q12934 665 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 UGCGQ16739 394 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 SLC35D3Q5M8T2 416 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 SLC16A9Q7RTY1 509 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 ABI3BPQ7Z7G0 1075 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 TIGD4Q8IY51 512 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 ANKRD13CQ8N6S4 541 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 NIPA2Q8N8Q9 360 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 BMPERQ8N8U9 685 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 OLIG1Q8TAK6 271 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 SUSD6Q92537 303 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 GIMAP5Q96F15 307 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 ADPGKQ9BRR6 497 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 THUMPD3Q9BV44 507 aaKnown RBP3.45□□□□□ -1.86
CBX3-207ENST00000481300 MTMR12Q9C0I1 747 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 OR2B2Q9GZK3 357 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 FAM49AQ9H0Q0 323 aaPredicted RBP3.45□□□□□ -1.86
CBX3-207ENST00000481300 SNX25Q9H3E2 840 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 CPVLQ9H3G5 476 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 Q9H8V8 135 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 GRPEL1Q9HAV7 217 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 DNAJC4Q9NNZ3 241 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 C19orf25Q9UFG5 118 aaPredicted RBP3.45□□□□□ -1.86
CBX3-207ENST00000481300 TNNQ9UQP3 1299 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 MED14O60244 1454 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 ADGRB1O14514 1584 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 PREX1Q8TCU6 1659 aa3.45□□□□□ -1.86
CBX3-207ENST00000481300 TECPR2O15040 1411 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 ALKQ9UM73 1620 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 ADAMTSL3P82987 1691 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 KTN1Q86UP2 1357 aaKnown RBP3.44□□□□□ -1.86
CBX3-207ENST00000481300 TRAV24A0A0B4J272 114 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 A0A1W2PPK0 400 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 A0A1W2PPW3 197 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 PSMA7O14818 248 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 KLF11O14901 512 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 EPHB6O15197 1021 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 TRMUO75648 421 aaKnown RBP3.44□□□□□ -1.86
CBX3-207ENST00000481300 EML2O95834 649 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 GBAP04062 536 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 RPN1P04843 607 aaKnown RBP3.44□□□□□ -1.86
CBX3-207ENST00000481300 HMBSP08397 361 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 VIMP08670 466 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms