RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 HOXB9P17482 250 aaPredicted RBP22.21■■□□□ 1.15
CCDC7-206ENST00000476558 PRPS1L1P21108 318 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 PEX2P28328 305 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 RPS13P62277 151 aaKnown RBP22.21■■□□□ 1.15
CCDC7-206ENST00000476558 ACSM2AQ08AH3 577 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 MTAPQ13126 283 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 LRIF1Q5T3J3 769 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 ACSM2BQ68CK6 577 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 KIAA1324Q6UXG2 1013 aaKnown RBP22.21■■□□□ 1.15
CCDC7-206ENST00000476558 MSANTD1Q6ZTZ1 278 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 TMEM102Q8N9M5 508 aaPredicted RBP22.21■■□□□ 1.15
CCDC7-206ENST00000476558 KCTD14Q9BQ13 255 aaPredicted RBP22.21■■□□□ 1.15
CCDC7-206ENST00000476558 ECSITQ9BQ95 431 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 FGF22Q9HCT0 170 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 SLC2A4RGQ9NR83 387 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 SLC25A37Q9NYZ2 338 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 EGFL7Q9UHF1 273 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 KCNK6Q9Y257 313 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 CROCCQ5TZA2 2017 aa22.21■■□□□ 1.15
CCDC7-206ENST00000476558 LATO43561 262 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 RPSAP08865 295 aaKnown RBP22.2■■□□□ 1.14
CCDC7-206ENST00000476558 S100A3P33764 101 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 HNRNPFP52597 415 aaKnown RBP22.2■■□□□ 1.14
CCDC7-206ENST00000476558 TRIP10Q15642 601 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 DUS1LQ6P1R4 473 aaKnown RBP22.2■■□□□ 1.14
CCDC7-206ENST00000476558 GALNT18Q6P9A2 607 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 LRGUKQ96M69 825 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 PKP2Q99959 881 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 MYOCQ99972 504 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 EBPLQ9BY08 206 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 KLHL4Q9C0H6 718 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 PAIP1Q9H074 479 aaKnown RBP22.2■■□□□ 1.14
CCDC7-206ENST00000476558 KCNH6Q9H252 994 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 COPS7BQ9H9Q2 264 aaPredicted RBP22.2■■□□□ 1.14
CCDC7-206ENST00000476558 DMRT3Q9NQL9 472 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 A0A1W2PPV9 198 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 TCRBV21S2A2A0A5A6 115 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 STAMBPO95630 424 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 CDH1P12830 882 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 CD72P21854 359 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 PTPN6P29350 595 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 GRIA3P42263 894 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 PIK3CBP42338 1070 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 CLCA4Q14CN2 919 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 HIST2H2ACQ16777 129 aaPredicted RBP22.2■■□□□ 1.14
CCDC7-206ENST00000476558 SPIN4Q56A73 249 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 THEMIS2Q5TEJ8 643 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 HIST2H2AA3Q6FI13 130 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 IZUMO2Q6UXV1 221 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 C1orf52Q8N6N3 182 aaKnown RBP22.2■■□□□ 1.14
CCDC7-206ENST00000476558 TRIM15Q9C019 465 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 VCX3BQ9H321 246 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 SNX13Q9Y5W8 968 aa22.2■■□□□ 1.14
CCDC7-206ENST00000476558 ZNF839A8K0R7 811 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 ERN1O75460 977 aaKnown RBP22.19■■□□□ 1.14
CCDC7-206ENST00000476558 CLDN2P57739 230 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 MTPNP58546 118 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 PLIN5Q00G26 463 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 UGT8Q16880 541 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 DPY19L1Q2PZI1 675 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 RUNDC3AQ59EK9 446 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 PDSS2Q86YH6 399 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 TICAM1Q8IUC6 712 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 SPPL2CQ8IUH8 684 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 SYT12Q8IV01 421 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 C2orf73Q8N5S3 287 aaPredicted RBP22.19■■□□□ 1.14
CCDC7-206ENST00000476558 SMPDL3AQ92484 453 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 BMFQ96LC9 184 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 C12orf66Q96MD2 445 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 OSGEPL1Q9H4B0 414 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 CCM2LQ9NUG4 571 aaPredicted RBP22.19■■□□□ 1.14
CCDC7-206ENST00000476558 ARMC1Q9NVT9 282 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 EBF1Q9UH73 591 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 USP22Q9UPT9 525 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 PCDHB3Q9Y5E6 796 aa22.19■■□□□ 1.14
CCDC7-206ENST00000476558 A0A096LPI6 279 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 PRSS38A1L453 326 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 LRATO95237 230 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 IDSP22304 550 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 MEF2AQ02078 507 aaPredicted RBP22.18■■□□□ 1.14
CCDC7-206ENST00000476558 IFNEQ86WN2 208 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 LINC01555Q8NAE3 123 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 ZNF740Q8NDX6 193 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 ABHD11Q8NFV4 315 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 UBE2E3Q969T4 207 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 ZNF583Q96ND8 569 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 CAMK1GQ96NX5 476 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 FERD3LQ96RJ6 166 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 PCBD2Q9H0N5 130 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 PELI2Q9HAT8 420 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 WASH6PQ9NQA3 447 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 SLC6A13Q9NSD5 602 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 GPSM3Q9Y4H4 160 aa22.18■■□□□ 1.14
CCDC7-206ENST00000476558 SCN2BO60939 215 aa22.17■■□□□ 1.14
CCDC7-206ENST00000476558 MYO1DO94832 1006 aa22.17■■□□□ 1.14
CCDC7-206ENST00000476558 SRFP11831 508 aa22.17■■□□□ 1.14
CCDC7-206ENST00000476558 OR4D2P58180 307 aa22.17■■□□□ 1.14
CCDC7-206ENST00000476558 SRSF11Q05519 484 aaKnown RBP22.17■■□□□ 1.14
CCDC7-206ENST00000476558 SF1Q15637 639 aaKnown RBP22.17■■□□□ 1.14
CCDC7-206ENST00000476558 LRRC36Q1X8D7 754 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms