RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PTPN4P29074 926 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 ATP6V0D1P61421 351 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 RPS15P62841 145 aaKnown RBP16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 SLC18A2Q05940 514 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 CSHL1Q14406 222 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 GBX1Q14549 363 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 ACSBG2Q5FVE4 666 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 TNFAIP8L3Q5GJ75 292 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 FAM69BQ5VUD6 431 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 TAX1BP1Q86VP1 789 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 DSELQ8IZU8 1212 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 GIMAP7Q8NHV1 300 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 EEF1AKMT1Q8WVE0 214 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 N4BP2L2Q92802 583 aaPredicted RBP16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 ABHD17AQ96GS6 310 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 SLC7A5P2Q9GIP4 190 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 DERL2Q9GZP9 239 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 IQCGQ9H095 443 aaKnown RBP16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 FAM107BQ9H098 131 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 ACTR5Q9H9F9 607 aaPredicted RBP16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 OR6C2Q9NZP2 312 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 RUVBL2Q9Y230 463 aaKnown RBP16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 POLHQ9Y253 713 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 KLHL20Q9Y2M5 609 aa16.39■□□□□ 0.21
PRPF40A-204ENST00000450303 BOD1L1Q8NFC6 3051 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 A0A0J9YY10 115 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 CCDC189A1A4V9 331 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 PABPN1LA6NDY0 278 aaKnown RBP16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 ZNF749O43361 778 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 CTSBP07858 339 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 PKLRP30613 574 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 CCNFP41002 786 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 CSRP3P50461 194 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 ITGA1P56199 1179 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 GRB7Q14451 532 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 PTCHD3Q3KNS1 767 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 COLEC12Q5KU26 742 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 EXOC3L1Q86VI1 746 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 C4orf33Q8N1A6 199 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 C9orf43Q8TAL5 461 aaPredicted RBP16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 UBXN10Q96LJ8 280 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 GPR87Q9BY21 358 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 SPRTNQ9H040 489 aaPredicted RBP16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 GRID1Q9ULK0 1009 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 CCDC88CQ9P219 2028 aa16.38■□□□□ 0.21
PRPF40A-204ENST00000450303 SEC16AO15027 2179 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 KRT87PA6NCN2 255 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 E7EQ34 232 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 SUV39H1O43463 412 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 KDM1AO60341 852 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 WISP3O95389 354 aaPredicted RBP16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 RPN2P04844 631 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 C8GP07360 202 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 RBP1P09455 135 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 LSP1P33241 339 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 RORAP35398 523 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 BDKRB1P46663 353 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 RAB28P51157 221 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 PGGT1BP53609 377 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 IL10RAQ13651 578 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 ACAP2Q15057 778 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 CCSMST1Q4G0I0 132 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 TTC23LQ6PF05 361 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 TMEM207Q6UWW9 146 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 UNC5DQ6UXZ4 953 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 ENDOVQ8N8Q3 282 aaKnown RBP16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 LINC01555Q8NAE3 123 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 MAGEC3Q8TD91 643 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 BCAS4Q8TDM0 211 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 KCTD4Q8WVF5 259 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 NXNL1Q96CM4 212 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 TCTN2Q96GX1 697 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 SCYL1Q96KG9 808 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 LRFN5Q96NI6 719 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 MENTQ9BUN1 341 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 TRIM54Q9BYV2 358 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 EPN3Q9H201 632 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 SSU72Q9NP77 194 aaKnown RBP16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 MKS1Q9NXB0 559 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 TUBD1Q9UJT1 453 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 MAN2B2Q9Y2E5 1009 aa16.37■□□□□ 0.21
PRPF40A-204ENST00000450303 K7EM74 188 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 SLC16A5O15375 505 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 ZBTB14O43829 449 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 DNAJB5O75953 348 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 OR2B3O76000 313 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 CATP04040 527 aaKnown RBP16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 MSL3P1P0C860 447 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 CD1DP15813 335 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 CRHR1P34998 444 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 GABRA4P48169 554 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 IRF9Q00978 393 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 KIR2DS3Q14952 304 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 SLC5A12Q1EHB4 618 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 C1orf189Q5VU69 101 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 CYHR1Q6ZMK1 362 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 ZNF517Q6ZMY9 492 aaPredicted RBP16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 ATG14Q6ZNE5 492 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 SYVN1Q86TM6 617 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 SPNS2Q8IVW8 549 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms