RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 PCDHB9Q9Y5E1 797 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 PCM1Q15154 2024 aa6.77□□□□□ -1.32
NEDD9-216ENST00000620854 MYLKQ15746 1914 aa6.77□□□□□ -1.32
NEDD9-216ENST00000620854 PNMA8CA0A1B0GUJ8 204 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 KRT87PA6NCN2 255 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 FAM25AB3EWG3 89 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 FAM25CB3EWG5 89 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 FAM25GB3EWG6 89 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 CTDSP2O14595 271 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 RGS14O43566 566 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 TNFRSF21O75509 655 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 COX7A2P14406 83 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 NFKB2Q00653 900 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF284Q2VY69 593 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 FBXL22Q6P050 247 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 SCD5Q86SK9 330 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 NLGN4XQ8N0W4 816 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 DEPDC4Q8N2C3 294 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 TMEM132CQ8N3T6 1108 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 SVOPQ8N4V2 548 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF548Q8NEK5 533 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 GPR156Q8NFN8 814 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 RHEBL1Q8TAI7 183 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 ARRDC2Q8TBH0 407 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 MYEOVQ96EZ4 313 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 VMP1Q96GC9 406 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF300Q96RE9 604 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 HOXD1Q9GZZ0 328 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 ADPRHL2Q9NX46 363 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 EHD3Q9NZN3 535 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 LCHNA4D1U4 455 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 CCRL2O00421 344 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 NUAK1O60285 661 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 PEX11BO96011 259 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 RPS17P08708 135 aaKnown RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 TNFRSF1BP20333 461 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 MC4RP32245 332 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 KRT20P35900 424 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 EIF2DP41214 584 aaKnown RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 HNF4AP41235 474 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 CRATP43155 626 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 SLC35A2P78381 396 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 ZXDBP98169 803 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 C1DQ13901 141 aaKnown RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 GBX1Q14549 363 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 CBX2Q14781 532 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 PDZK1Q5T2W1 519 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 IRAK1BP1Q5VVH5 260 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 NXNL2Q5VZ03 156 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 MMAAQ8IVH4 418 aaKnown RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 TCAIMQ8N3R3 496 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 RNF175Q8N4F7 328 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 PARP16Q8N5Y8 322 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 BRSK1Q8TDC3 778 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 ISG20Q96AZ6 181 aaKnown RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 RNFT2Q96EX2 444 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 PSD2Q9BQI7 771 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 COPS4Q9BT78 406 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 BRINP2Q9C0B6 783 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 NECTIN3Q9NQS3 549 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 ASAH2Q9NR71 780 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 DNMT3LQ9UJW3 386 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF490Q9ULM2 529 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 EFCAB10A6NFE3 127 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 PCDHGA12O60330 932 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 GLUD1P00367 558 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 PKMP14618 531 aaKnown RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 RGRP47804 291 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 PRKAG1P54619 331 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 RPP38P78345 283 aaKnown RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 TOP3AQ13472 1001 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 GTF2H2Q13888 395 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 SF1Q15637 639 aaKnown RBP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 UAP1L1Q3KQV9 507 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 COQ5Q5HYK3 327 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 SNAP47Q5SQN1 464 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 DDI2Q5TDH0 399 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 GTF2H2CQ6P1K8 395 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 LINGO4Q6UY18 593 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 GDPD3Q7L5L3 318 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 GOLGA7Q7Z5G4 137 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF605Q86T29 641 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 RAB42Q8N4Z0 105 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 C19orf18Q8NEA5 215 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 TMEM159Q96B96 161 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 NEDD4LQ96PU5 975 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 DEPDC7Q96QD5 511 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 ZYG11BQ9C0D3 744 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 DERL2Q9GZP9 239 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 ARNT2Q9HBZ2 717 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.77□□□□□ -1.33
NEDD9-216ENST00000620854 SPATA2Q9UM82 520 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 BTBD3Q9Y2F9 522 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 N6AMT1Q9Y5N5 214 aa6.77□□□□□ -1.33
NEDD9-216ENST00000620854 CDH23Q9H251 3354 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 DYRK3O43781 588 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 EPN2O95208 641 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 GRK3P35626 688 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 PBX3P40426 434 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 CASP3P42574 277 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms