RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SLCO2A1Q92959 643 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 CABS1Q96KC9 395 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 ENAMQ9NRM1 1142 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 INTS7Q9NVH2 962 aaKnown RBP11.8□□□□□ -0.52
LSM6-204ENST00000504181 POLG2Q9UHN1 485 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 FAM215AQ9Y5M1 114 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 ABCA1O95477 2261 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 LOC105369274A0A096LPK9 316 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 LOC102723532A0A0G2JNH3 316 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 DDX3XO00571 662 aaKnown RBP eCLIP11.79□□□□□ -0.521e-8■■■■□ 19.9
LSM6-204ENST00000504181 SRP72O76094 671 aaKnown RBP11.79□□□□□ -0.52
LSM6-204ENST00000504181 ATP1B2P14415 290 aaPredicted RBP11.79□□□□□ -0.52
LSM6-204ENST00000504181 SLC25A11Q02978 314 aaKnown RBP11.79□□□□□ -0.52
LSM6-204ENST00000504181 RUNX1T1Q06455 604 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 RPA4Q13156 261 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 DPYSL3Q14195 570 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 MESDQ14696 234 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 BRD3Q15059 726 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 FIGNQ5HY92 759 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 KAZNQ674X7 775 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 B3GNT6Q6ZMB0 384 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 CPEB2Q7Z5Q1 589 aaKnown RBP11.79□□□□□ -0.52
LSM6-204ENST00000504181 ZC3H7AQ8IWR0 971 aaKnown RBP11.79□□□□□ -0.52
LSM6-204ENST00000504181 OR4N4Q8N0Y3 316 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 AMER3Q8N944 861 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 LINC01555Q8NAE3 123 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 OR5K2Q8NHB8 316 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 METTL21AQ8WXB1 218 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 MMABQ96EY8 250 aaPredicted RBP11.79□□□□□ -0.52
LSM6-204ENST00000504181 PLCD4Q9BRC7 762 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 DEFB127Q9H1M4 99 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 MKKSQ9NPJ1 570 aaPredicted RBP11.79□□□□□ -0.52
LSM6-204ENST00000504181 PLSCR2Q9NRY7 297 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 TAB2Q9NYJ8 693 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 MYO1AQ9UBC5 1043 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 CIDEBQ9UHD4 219 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 CRLS1Q9UJA2 301 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 FAM169AQ9Y6X4 670 aa11.79□□□□□ -0.52
LSM6-204ENST00000504181 A0A0J9YVX5 310 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 A0A1W2PPR1 153 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 CLCA1A8K7I4 914 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 SYT5O00445 386 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 STX7O15400 261 aaKnown RBP11.78□□□□□ -0.52
LSM6-204ENST00000504181 PRPF4O43172 522 aaKnown RBP eCLIP11.78□□□□□ -0.52
LSM6-204ENST00000504181 KCNAB3O43448 404 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 NRP2O60462 931 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 SRPX2O60687 465 aaPredicted RBP11.78□□□□□ -0.52
LSM6-204ENST00000504181 ERVK-10P10266 1014 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 PKLRP30613 574 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 GJC1P36383 396 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 PPIDQ08752 370 aaKnown RBP11.78□□□□□ -0.52
LSM6-204ENST00000504181 AP1B1Q10567 949 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 SLC14A2Q15849 920 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 CATSPEREQ5SY80 951 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 MFSD4BQ5TF39 518 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 RTL6Q6ICC9 239 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 ZNF227Q86WZ6 799 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 TGIF2Q9GZN2 237 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 CDCP1Q9H5V8 836 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 FAM96AQ9H5X1 160 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 VPS37BQ9H9H4 285 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 LUC7LQ9NQ29 371 aaKnown RBP11.78□□□□□ -0.52
LSM6-204ENST00000504181 HACD3Q9P035 362 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 FKBPLQ9UIM3 349 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 CDC14AQ9UNH5 594 aa11.78□□□□□ -0.52
LSM6-204ENST00000504181 RAI1Q7Z5J4 1906 aaPredicted RBP11.78□□□□□ -0.52
LSM6-204ENST00000504181 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.77□□□□□ -0.52
LSM6-204ENST00000504181 FIGNL2A6NMB9 653 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 CFAP99D6REC4 459 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 SIX3O95343 332 aaPredicted RBP11.77□□□□□ -0.53
LSM6-204ENST00000504181 EPXP11678 715 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 NID1P14543 1247 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 ACADLP28330 430 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 SLC26A3P40879 764 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 ITGA8P53708 1063 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 KRTAP1-1Q07627 177 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 SF1Q15637 639 aaKnown RBP11.77□□□□□ -0.53
LSM6-204ENST00000504181 PRSS57Q6UWY2 283 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 SULF2Q8IWU5 870 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 LGI4Q8N135 537 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 SLC5A8Q8N695 610 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 C16orf52Q8NHV5 167 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 FAM71BQ8TC56 605 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 PERPQ96FX8 193 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 ZNF830Q96NB3 372 aaPredicted RBP11.77□□□□□ -0.53
LSM6-204ENST00000504181 COPS8Q99627 209 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 SH3GL2Q99962 352 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 ZFYVE21Q9BQ24 234 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 GLOD4Q9HC38 313 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 ARL5AQ9Y689 179 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 SCINQ9Y6U3 715 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 DYSFO75923 2080 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 PKD1L1Q8TDX9 2849 aa11.77□□□□□ -0.53
LSM6-204ENST00000504181 A0A0A6YYK5 440 aaPredicted RBP11.76□□□□□ -0.53
LSM6-204ENST00000504181 LOC285095A0A1B0GVY8 99 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 TUBAL3A6NHL2 446 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 NDC80O14777 642 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 KDM1AO60341 852 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 AP2A1O95782 977 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 ANXA5P08758 320 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms