RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 Q6ZSR9 355 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 HS3ST5Q8IZT8 346 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 SETD9Q8NE22 299 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 HM13Q8TCT9 377 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 TTLL2Q9BWV7 592 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 PRRG3Q9BZD7 231 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 PDFQ9HBH1 243 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 KRT84Q9NSB2 600 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 HCFC1R1Q9NWW0 138 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 OARD1Q9Y530 152 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 CEP350Q5VT06 3117 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 MAGEB17A8MXT2 336 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 CLIC1O00299 241 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 TGM5O43548 720 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 CD300CQ08708 224 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 SELPLGQ14242 412 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 PDE12Q6L8Q7 609 aaKnown RBP10.24□□□□□ -0.77
CALD1-203ENST00000393118 PACRGLQ8N7B6 248 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 ANKFN1Q8N957 763 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 OR4A15Q8NGL6 344 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 TSPEARQ8WU66 669 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 TRIB3Q96RU7 358 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 AMBNQ9NP70 447 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 ZDHHC4Q9NPG8 344 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 SAMD4AQ9UPU9 718 aaKnown RBP10.24□□□□□ -0.77
CALD1-203ENST00000393118 AP3M1Q9Y2T2 418 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 TPRKBQ9Y3C4 175 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 PAPPA2Q9BXP8 1791 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 ANK1P16157 1881 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 CROCCQ5TZA2 2017 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 PER2O15055 1255 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 SCAMP1O15126 338 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 SOCS5O75159 536 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 CREG1O75629 220 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 BMP2P12643 396 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 MRPL28Q13084 256 aaKnown RBP10.24□□□□□ -0.77
CALD1-203ENST00000393118 MEP1AQ16819 746 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 UGT3A2Q3SY77 523 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 RNF175Q8N4F7 328 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 LEMD2Q8NC56 503 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 GALNT6Q8NCL4 622 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 CSGALNACT1Q8TDX6 532 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 SUSD6Q92537 303 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 ZNF597Q96LX8 424 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 OR2AG1Q9H205 316 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 BTBD3Q9Y2F9 522 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 NOX1Q9Y5S8 564 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 SUV39H1O43463 412 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 LEFTY1O75610 366 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 IGLV3-27P01718 113 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 OPN1SWP03999 348 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 DBTP11182 482 aaKnown RBP10.24□□□□□ -0.77
CALD1-203ENST00000393118 SRCP12931 536 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 ENGP17813 658 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 PRKAG1P54619 331 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 SF1Q15637 639 aaKnown RBP10.24□□□□□ -0.77
CALD1-203ENST00000393118 USP39Q53GS9 565 aaKnown RBP10.24□□□□□ -0.77
CALD1-203ENST00000393118 DGKKQ5KSL6 1271 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 CES5AQ6NT32 575 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 RRM2BQ7LG56 351 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 ZNF683Q8IZ20 524 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 C1orf52Q8N6N3 182 aaKnown RBP10.24□□□□□ -0.77
CALD1-203ENST00000393118 PROX1Q92786 737 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 CERS4Q9HA82 394 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 CD320Q9NPF0 282 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 TDP1Q9NUW8 608 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 VPS29Q9UBQ0 182 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 RAB23Q9ULC3 237 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 CLEC4EQ9ULY5 219 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 PDE10AQ9Y233 779 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 MAP4K5Q9Y4K4 846 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 N6AMT1Q9Y5N5 214 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 CEP290O15078 2479 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 B4GAT1O43505 415 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 TMCC2O75069 709 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 ERN1O75460 977 aaKnown RBP10.24□□□□□ -0.77
CALD1-203ENST00000393118 ANGPTL1O95841 491 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 TGFB1P01137 390 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 HTR1EP28566 365 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 AKR1D1P51857 326 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 CSTF3Q12996 717 aaKnown RBP10.24□□□□□ -0.77
CALD1-203ENST00000393118 RAB33AQ14088 237 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 SLC14A2Q15849 920 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 ZNF783Q6ZMS7 281 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 S100ZQ8WXG8 99 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 RHBDF1Q96CC6 855 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 LINC00597Q9H2U6 94 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 TP63Q9H3D4 680 aaPredicted RBP10.24□□□□□ -0.77
CALD1-203ENST00000393118 NEK6Q9HC98 313 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 MOV10Q9HCE1 1003 aaKnown RBP10.24□□□□□ -0.77
CALD1-203ENST00000393118 ARMC1Q9NVT9 282 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 UCKL1Q9NWZ5 548 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 PRKAB1Q9Y478 270 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 PLXNA1Q9UIW2 1896 aa10.24□□□□□ -0.77
CALD1-203ENST00000393118 ANKDD1BA6NHY2 528 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 AQP9O43315 295 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 CLPXO76031 633 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 HLA-EP13747 358 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 ACVR1Q04771 509 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 CAPN13Q6MZZ7 669 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms