RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 MYCLP1P12525 358 aaPredicted RBP19.93■□□□□ 0.78
VEGFA-204ENST00000372064 HOXA9P31269 272 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 TTKP33981 857 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 BDKRB1P46663 353 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 CTBSQ01459 385 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 SRSF11Q05519 484 aaKnown RBP19.93■□□□□ 0.78
VEGFA-204ENST00000372064 NAE1Q13564 534 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 DOC2AQ14183 400 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 AP1ARQ63HQ0 302 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 AGTRAPQ6RW13 159 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 BADQ92934 168 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 DTNBP1Q96EV8 351 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 METTL2AQ96IZ6 378 aaKnown RBP19.93■□□□□ 0.78
VEGFA-204ENST00000372064 WRAP53Q9BUR4 548 aaKnown RBP19.93■□□□□ 0.78
VEGFA-204ENST00000372064 SMURF2Q9HAU4 748 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 FAM118AQ9NWS6 357 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 A0A1B0GVG6 124 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 KPNA3O00505 521 aaPredicted RBP19.93■□□□□ 0.78
VEGFA-204ENST00000372064 MAGEA2P43356 314 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 WNT3P56703 355 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 TMEM115Q12893 351 aaPredicted RBP19.93■□□□□ 0.78
VEGFA-204ENST00000372064 PMS2P3Q13401 168 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 TTC23Q5W5X9 447 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 DOK6Q6PKX4 331 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 CLVS1Q8IUQ0 354 aaPredicted RBP19.93■□□□□ 0.78
VEGFA-204ENST00000372064 SYT12Q8IV01 421 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 OR8J2Q8NGG1 315 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 OR5K1Q8NHB7 308 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 MED8Q96G25 268 aa19.93■□□□□ 0.78
VEGFA-204ENST00000372064 REXO4Q9GZR2 422 aaKnown RBP19.93■□□□□ 0.78
VEGFA-204ENST00000372064 SRPRAP08240 638 aaKnown RBP19.92■□□□□ 0.78
VEGFA-204ENST00000372064 ELK4P28324 431 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 PBLDP30039 288 aaPredicted RBP19.92■□□□□ 0.78
VEGFA-204ENST00000372064 DDX39BQ13838 428 aaKnown RBP19.92■□□□□ 0.78
VEGFA-204ENST00000372064 GPR155Q7Z3F1 870 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 CHPFQ8IZ52 775 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 PGBD3Q8N328 593 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 OR4K3Q96R72 315 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 MTERF1Q99551 399 aaKnown RBP19.92■□□□□ 0.78
VEGFA-204ENST00000372064 CCM2Q9BSQ5 444 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 GNGT2O14610 69 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 SLC9A3R1O14745 358 aaPredicted RBP19.92■□□□□ 0.78
VEGFA-204ENST00000372064 NPC1O15118 1278 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 HSD3B1P14060 373 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 HSD3B2P26439 372 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 DCTP40126 519 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 HNF4AP41235 474 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 MAPK9P45984 424 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 ZNF658BQ4V348 819 aaPredicted RBP19.92■□□□□ 0.78
VEGFA-204ENST00000372064 CES5AQ6NT32 575 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 THAP5Q7Z6K1 395 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 NRSN1Q8IZ57 195 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 HS3ST5Q8IZT8 346 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 EID3Q8N140 333 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 OR7A2PQ8NGA2 310 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 OR56A3Q8NH54 315 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 DOK1Q99704 481 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 AMBRA1Q9C0C7 1298 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 LIN28AQ9H9Z2 209 aaKnown RBP19.92■□□□□ 0.78
VEGFA-204ENST00000372064 BRF2Q9HAW0 419 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 EBF1Q9UH73 591 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 RUVBL1Q9Y265 456 aaKnown RBP19.92■□□□□ 0.78
VEGFA-204ENST00000372064 COQ6Q9Y2Z9 468 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 MRPS23Q9Y3D9 190 aaKnown RBP19.92■□□□□ 0.78
VEGFA-204ENST00000372064 CCNDBP1O95273 360 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 CPNE6O95741 557 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 HNRNPA1P09651 372 aaKnown RBP eCLIP19.92■□□□□ 0.78
VEGFA-204ENST00000372064 ADH5P11766 374 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 PDHA2P29803 388 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 YAP1P46937 504 aaKnown RBP19.92■□□□□ 0.78
VEGFA-204ENST00000372064 RAB39AQ14964 217 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 ZNF773Q6PK81 442 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 TMEM220Q6QAJ8 160 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 KCTD8Q6ZWB6 473 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 TMEM179BQ7Z7N9 219 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 ZNF420Q8TAQ5 688 aaPredicted RBP19.92■□□□□ 0.78
VEGFA-204ENST00000372064 RSPRY1Q96DX4 576 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 CXorf21Q9HAI6 301 aa19.92■□□□□ 0.78
VEGFA-204ENST00000372064 C1QCP02747 245 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 CATP04040 527 aaKnown RBP19.91■□□□□ 0.78
VEGFA-204ENST00000372064 E2F2Q14209 437 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 SF1Q15637 639 aaKnown RBP19.91■□□□□ 0.78
VEGFA-204ENST00000372064 TMEM240Q5SV17 173 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 ERAP2Q6P179 960 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 C8orf59Q8N0T1 100 aaPredicted RBP19.91■□□□□ 0.78
VEGFA-204ENST00000372064 TBC1D20Q96BZ9 403 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 TUBA1CQ9BQE3 449 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 POLR1BQ9H9Y6 1135 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 FAM120CQ9NX05 1096 aaKnown RBP19.91■□□□□ 0.78
VEGFA-204ENST00000372064 FPGTO14772 594 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 CDK4P11802 303 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 DCKP27707 260 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 IMPA1P29218 277 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 PPIGQ13427 754 aaKnown RBP eCLIP19.91■□□□□ 0.781e-7■■□□□ 12.5
VEGFA-204ENST00000372064 SPESP1Q6UW49 350 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 ZNF707Q96C28 371 aaPredicted RBP19.91■□□□□ 0.78
VEGFA-204ENST00000372064 PKP4Q99569 1192 aa19.91■□□□□ 0.78
VEGFA-204ENST00000372064 SAMD4AQ9UPU9 718 aaKnown RBP19.91■□□□□ 0.78
VEGFA-204ENST00000372064 NUP214P35658 2090 aaPredicted RBP19.9■□□□□ 0.78
VEGFA-204ENST00000372064 EVPLLA8MZ36 301 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms