RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 OR4A47Q6IF82 309 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 TATDN1Q6P1N9 297 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ARSKQ6UWY0 536 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 B3GLCTQ6Y288 498 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 GBP6Q6ZN66 633 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 PLPPR4Q7Z2D5 763 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 NRARPQ7Z6K4 114 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 TAF8Q7Z7C8 310 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 C17orf64Q86WR6 236 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 RCOR2Q8IZ40 523 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 CLIP4Q8N3C7 705 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ELP5Q8TE02 316 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 SLC25A28Q96A46 364 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMEM186Q96B77 213 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 SPDL1Q96EA4 605 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 CABS1Q96KC9 395 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 LYZL4Q96KX0 146 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 MUS81Q96NY9 551 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 RUFY1Q96T51 708 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 HNRNPABQ99729 332 aaKnown RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 CPNE1Q99829 537 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ATG101Q9BSB4 218 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 FSD1Q9BTV5 496 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 FAM234AQ9H0X4 552 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 PCED1AQ9H1Q7 454 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMEM206Q9H813 350 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 MINDY3Q9H8M7 445 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 FAM207AQ9NSI2 230 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ACOXLQ9NUZ1 547 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 COX16Q9P0S2 106 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 MRPS2Q9Y399 296 aaKnown RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 KIF14Q15058 1648 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 H3BNX3 289 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 TULP2O00295 520 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 MEIS2O14770 477 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ANGPT2O15123 496 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 PCDH7O60245 1069 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 PRPSAP2O60256 369 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ATG13O75143 517 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 MTRF1O75570 445 aaKnown RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 CAMTA2O94983 1202 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 TGDSO95455 350 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 IGHV4-39P01824 125 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 MT-ND3P03897 115 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ERBB2P04626 1255 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 PRSS1P07477 247 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 FCGR1AP12314 374 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 GP9P14770 177 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 CPA3P15088 417 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 EFNA1P20827 205 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 S1PR1P21453 382 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 HRH2P25021 359 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 HLA-FP30511 346 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 RPL9P32969 192 aaKnown RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 MC5RP33032 325 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 FMO5P49326 533 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 EMDP50402 254 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 SUOXP51687 545 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 HMGA2P52926 109 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 GPS2Q13227 327 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ALG11Q2TAA5 492 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 MCMDC2Q4G0Z9 681 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZNF362Q5T0B9 420 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 NDUFAF5Q5TEU4 345 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 NSUN5P2Q63ZY6 315 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 PPP1R21Q6ZMI0 780 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 CREB3L2Q70SY1 520 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 PIWIL3Q7Z3Z3 882 aaKnown RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 VRK3Q8IV63 474 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 LINC00346Q8IVM7 164 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 CCDC60Q8IWA6 550 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 BATF2Q8N1L9 274 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 CCDC63Q8NA47 563 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZNF397Q8NF99 534 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 DMBX1Q8NFW5 382 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 OR13C3Q8NGS6 347 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 GIPC3Q8TF64 312 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 SMG7Q92540 1137 aaKnown RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 FIG4Q92562 907 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 PTP4A1Q93096 173 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZKSCAN4Q969J2 545 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 THOC1Q96FV9 657 aaKnown RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 C5orf30Q96GV9 206 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 PDLIM5Q96HC4 596 aaKnown RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZNF48Q96MX3 618 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZNF582Q96NG8 517 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 PKP2Q99959 881 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 MRIQ9BWK5 157 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 GANQ9H2C0 597 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 DPAGT1Q9H3H5 408 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 SRD5A3Q9H8P0 318 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 MTHFD2LQ9H903 347 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 SP140LQ9H930 580 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 SYTL2Q9HCH5 934 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 PRMT8Q9NR22 394 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 MSRB1Q9NZV6 116 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 A0A1B0GUL6 1792 aa1.28□□□□□ -2.2
CTDSPL2-202ENST00000558373 PAPPA2Q9BXP8 1791 aa1.28□□□□□ -2.21
CTDSPL2-202ENST00000558373 TRIM77I1YAP6 450 aa1.28□□□□□ -2.21
CTDSPL2-202ENST00000558373 FLRT2O43155 660 aa1.28□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms