RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 AEBP2Q6ZN18 517 aaPredicted RBP6.84□□□□□ -1.31
CTDSPL2-202ENST00000558373 CHIC1Q5VXU3 224 aa6.25□□□□□ -1.41
CTDSPL2-202ENST00000558373 SENP3Q9H4L4 574 aaPredicted RBP5.72□□□□□ -1.49
CTDSPL2-202ENST00000558373 PHF23Q9BUL5 403 aaPredicted RBP5.62□□□□□ -1.51
CTDSPL2-202ENST00000558373 FOXD1Q16676 465 aa5.43□□□□□ -1.54
CTDSPL2-202ENST00000558373 POTEDQ86YR6 584 aa5.35□□□□□ -1.55
CTDSPL2-202ENST00000558373 DNAJC5BQ9UF47 199 aa5.15□□□□□ -1.58
CTDSPL2-202ENST00000558373 MSH5O43196 834 aa5.09□□□□□ -1.6
CTDSPL2-202ENST00000558373 PPP6R1Q9UPN7 881 aa4.94□□□□□ -1.62
CTDSPL2-202ENST00000558373 PIAS4Q8N2W9 510 aaPredicted RBP4.87□□□□□ -1.63
CTDSPL2-202ENST00000558373 ADRA2BP18089 450 aa4.82□□□□□ -1.64
CTDSPL2-202ENST00000558373 PLPPR3Q6T4P5 718 aa4.8□□□□□ -1.64
CTDSPL2-202ENST00000558373 DMRT2Q9Y5R5 561 aa4.59□□□□□ -1.67
CTDSPL2-202ENST00000558373 MAPK8IP2Q13387 824 aaPredicted RBP4.52□□□□□ -1.69
CTDSPL2-202ENST00000558373 ZBTB22O15209 634 aa4.42□□□□□ -1.7
CTDSPL2-202ENST00000558373 RNF39Q9H2S5 420 aa4.41□□□□□ -1.7
CTDSPL2-202ENST00000558373 HOXD11P31277 338 aaPredicted RBP4.39□□□□□ -1.71
CTDSPL2-202ENST00000558373 CACNB1Q02641 598 aaPredicted RBP4.34□□□□□ -1.71
CTDSPL2-202ENST00000558373 SCAF1Q9H7N4 1312 aaKnown RBP4.31□□□□□ -1.72
CTDSPL2-202ENST00000558373 PROM2Q8N271 834 aa4.29□□□□□ -1.72
CTDSPL2-202ENST00000558373 C1QBPQ07021 282 aaKnown RBP4.26□□□□□ -1.73
CTDSPL2-202ENST00000558373 RNF216Q9NWF9 866 aaPredicted RBP4.25□□□□□ -1.73
CTDSPL2-202ENST00000558373 PPP4R3CPQ6ZMV5 832 aa4.2□□□□□ -1.74
CTDSPL2-202ENST00000558373 CNKSR2Q8WXI2 1034 aa4.18□□□□□ -1.74
CTDSPL2-202ENST00000558373 CSRNP3Q8WYN3 585 aa4.18□□□□□ -1.74
CTDSPL2-202ENST00000558373 SLC4A2P04920 1241 aa4.12□□□□□ -1.75
CTDSPL2-202ENST00000558373 KCNA4P22459 653 aa4.11□□□□□ -1.75
CTDSPL2-202ENST00000558373 POTEHQ6S545 545 aa4.09□□□□□ -1.76
CTDSPL2-202ENST00000558373 DCAF8L1A6NGE4 600 aa4.04□□□□□ -1.76
CTDSPL2-202ENST00000558373 DSG3P32926 999 aa4.04□□□□□ -1.76
CTDSPL2-202ENST00000558373 NPM3O75607 178 aaKnown RBP4.03□□□□□ -1.76
CTDSPL2-202ENST00000558373 U3KPZ7 1027 aaPredicted RBP4.01□□□□□ -1.77
CTDSPL2-202ENST00000558373 DNAJC5Q9H3Z4 198 aa3.98□□□□□ -1.77
CTDSPL2-202ENST00000558373 SPINK5Q9NQ38 1064 aaPredicted RBP3.94□□□□□ -1.78
CTDSPL2-202ENST00000558373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.9□□□□□ -1.781e-6■■■□□ 19
CTDSPL2-202ENST00000558373 NCBP3Q53F19 620 aaKnown RBP3.88□□□□□ -1.79
CTDSPL2-202ENST00000558373 ATF5Q9Y2D1 282 aaPredicted RBP3.88□□□□□ -1.79
CTDSPL2-202ENST00000558373 MKRN4PQ13434 485 aaPredicted RBP3.79□□□□□ -1.8
CTDSPL2-202ENST00000558373 CAPN15O75808 1086 aa3.79□□□□□ -1.8
CTDSPL2-202ENST00000558373 ZNF219Q9P2Y4 722 aaPredicted RBP3.76□□□□□ -1.81
CTDSPL2-202ENST00000558373 SP7Q8TDD2 431 aaPredicted RBP3.75□□□□□ -1.81
CTDSPL2-202ENST00000558373 CHRDL2Q6WN34 429 aa3.75□□□□□ -1.81
CTDSPL2-202ENST00000558373 ATXN8OSP0DMR3 200 aa3.73□□□□□ -1.81
CTDSPL2-202ENST00000558373 ABCB7O75027 752 aa3.71□□□□□ -1.82
CTDSPL2-202ENST00000558373 FXR2P51116 673 aaKnown RBP eCLIP3.7□□□□□ -1.82
CTDSPL2-202ENST00000558373 ILDR1Q86SU0 546 aaPredicted RBP3.7□□□□□ -1.82
CTDSPL2-202ENST00000558373 RBM42Q9BTD8 480 aaKnown RBP3.7□□□□□ -1.82
CTDSPL2-202ENST00000558373 APLP2Q06481 763 aa3.69□□□□□ -1.82
CTDSPL2-202ENST00000558373 PIP4P2Q8N4L2 257 aa3.68□□□□□ -1.82
CTDSPL2-202ENST00000558373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.68□□□□□ -1.82
CTDSPL2-202ENST00000558373 MNX1P50219 401 aaPredicted RBP3.68□□□□□ -1.82
CTDSPL2-202ENST00000558373 HNRNPUL2Q1KMD3 747 aaKnown RBP3.68□□□□□ -1.82
CTDSPL2-202ENST00000558373 SAMD1Q6SPF0 538 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL2-202ENST00000558373 AKT1S1Q96B36 256 aa3.67□□□□□ -1.82
CTDSPL2-202ENST00000558373 TRHP20396 242 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL2-202ENST00000558373 EVX2Q03828 476 aa3.65□□□□□ -1.82
CTDSPL2-202ENST00000558373 REM2Q8IYK8 340 aaPredicted RBP3.63□□□□□ -1.83
CTDSPL2-202ENST00000558373 POLA2Q14181 598 aa3.62□□□□□ -1.83
CTDSPL2-202ENST00000558373 MYCNP04198 464 aaPredicted RBP3.61□□□□□ -1.83
CTDSPL2-202ENST00000558373 PITPNM1O00562 1244 aa3.6□□□□□ -1.83
CTDSPL2-202ENST00000558373 C19orf67A6NJJ6 358 aa3.58□□□□□ -1.84
CTDSPL2-202ENST00000558373 ZBTB12Q9Y330 459 aaPredicted RBP3.53□□□□□ -1.84
CTDSPL2-202ENST00000558373 POTEIP0CG38 1075 aa3.53□□□□□ -1.85
CTDSPL2-202ENST00000558373 OSCARQ8IYS5 282 aa3.53□□□□□ -1.85
CTDSPL2-202ENST00000558373 SLC4A1APQ9BWU0 796 aaKnown RBP3.52□□□□□ -1.85
CTDSPL2-202ENST00000558373 FOXD4L1Q9NU39 408 aa3.51□□□□□ -1.85
CTDSPL2-202ENST00000558373 PKD2Q13563 968 aa3.5□□□□□ -1.85
CTDSPL2-202ENST00000558373 GABBR2O75899 941 aa3.49□□□□□ -1.85
CTDSPL2-202ENST00000558373 SSUH2Q9Y2M2 353 aa3.49□□□□□ -1.85
CTDSPL2-202ENST00000558373 LHX8Q68G74 356 aa3.48□□□□□ -1.85
CTDSPL2-202ENST00000558373 BSNQ9UPA5 3926 aa3.48□□□□□ -1.85
CTDSPL2-202ENST00000558373 HAX1O00165 279 aa3.47□□□□□ -1.85
CTDSPL2-202ENST00000558373 EHMT2Q96KQ7 1210 aa3.46□□□□□ -1.86
CTDSPL2-202ENST00000558373 SPDYE2BA6NHP3 402 aa3.44□□□□□ -1.86
CTDSPL2-202ENST00000558373 SPDYE6P0CI01 402 aa3.44□□□□□ -1.86
CTDSPL2-202ENST00000558373 SPDYE2Q495Y8 402 aa3.44□□□□□ -1.86
CTDSPL2-202ENST00000558373 PRKAR2AP13861 404 aaKnown RBP3.42□□□□□ -1.86
CTDSPL2-202ENST00000558373 NPM1P06748 294 aaKnown RBP eCLIP3.41□□□□□ -1.86
CTDSPL2-202ENST00000558373 CLCN6P51797 869 aa3.41□□□□□ -1.86
CTDSPL2-202ENST00000558373 SGIP1Q9BQI5 828 aa3.4□□□□□ -1.87
CTDSPL2-202ENST00000558373 KDM4FA0A1W2PPD8 638 aa3.39□□□□□ -1.87
CTDSPL2-202ENST00000558373 POTEB2H3BUK9 544 aa3.38□□□□□ -1.87
CTDSPL2-202ENST00000558373 IFNLR1Q8IU57 520 aaPredicted RBP3.38□□□□□ -1.87
CTDSPL2-202ENST00000558373 OTUD5Q96G74 571 aa3.38□□□□□ -1.87
CTDSPL2-202ENST00000558373 RTN4Q9NQC3 1192 aaKnown RBP3.38□□□□□ -1.87
CTDSPL2-202ENST00000558373 LCE2DQ5TA82 110 aaPredicted RBP3.38□□□□□ -1.87
CTDSPL2-202ENST00000558373 SPDYE1Q8NFV5 336 aaPredicted RBP3.38□□□□□ -1.87
CTDSPL2-202ENST00000558373 RNF25Q96BH1 459 aaPredicted RBP3.37□□□□□ -1.87
CTDSPL2-202ENST00000558373 ZNF579Q8NAF0 562 aaKnown RBP3.36□□□□□ -1.87
CTDSPL2-202ENST00000558373 POTEJP0CG39 1038 aa3.35□□□□□ -1.87
CTDSPL2-202ENST00000558373 ARIH1Q9Y4X5 557 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL2-202ENST00000558373 CHADLQ6NUI6 762 aa3.33□□□□□ -1.88
CTDSPL2-202ENST00000558373 FARP1Q9Y4F1 1045 aaPredicted RBP3.33□□□□□ -1.88
CTDSPL2-202ENST00000558373 NKX1-1Q15270 411 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL2-202ENST00000558373 KDM2AQ9Y2K7 1162 aa3.32□□□□□ -1.88
CTDSPL2-202ENST00000558373 CREBZFQ9NS37 354 aa3.32□□□□□ -1.88
CTDSPL2-202ENST00000558373 PELP1Q8IZL8 1130 aaKnown RBP3.3□□□□□ -1.88
CTDSPL2-202ENST00000558373 PCDH10Q9P2E7 1040 aa3.3□□□□□ -1.88
CTDSPL2-202ENST00000558373 CD44P16070 742 aaKnown RBP3.29□□□□□ -1.88
CTDSPL2-202ENST00000558373 CHRM1P11229 460 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms