RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CDV3Q9UKY7 258 aaKnown RBP10.82□□□□□ -0.68
PBX1-212ENST00000540236 OAS3Q9Y6K5 1087 aaKnown RBP10.82□□□□□ -0.68
PBX1-212ENST00000540236 SLC28A1O00337 649 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 NPHS1O60500 1241 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 IL1BP01584 269 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 RPS17P08708 135 aaKnown RBP10.82□□□□□ -0.68
PBX1-212ENST00000540236 NR2C2P49116 596 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 AGTR2P50052 363 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 CCL23P55773 120 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 KIAA1024LP59773 190 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 GABARAPL2P60520 117 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 ARHGEF7Q14155 803 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 SFRP4Q6FHJ7 346 aaPredicted RBP10.82□□□□□ -0.68
PBX1-212ENST00000540236 IL20RBQ6UXL0 311 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 SHFQ7M4L6 423 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 OR5J2Q8NH18 312 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 IPCEF1Q8WWN9 437 aaPredicted RBP10.82□□□□□ -0.68
PBX1-212ENST00000540236 NR4A3Q92570 626 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 CDCA5Q96FF9 252 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 FCRL4Q96PJ5 515 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 TRIM54Q9BYV2 358 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 SETD4Q9NVD3 440 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 PHF11Q9UIL8 331 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 HCN2Q9UL51 889 aa10.82□□□□□ -0.68
PBX1-212ENST00000540236 PTPRJQ12913 1337 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 DLGAP1O14490 977 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 OR10H3O60404 316 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 NTSR2O95665 410 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 STAU1O95793 577 aaKnown RBP10.81□□□□□ -0.68
PBX1-212ENST00000540236 FABP1P07148 127 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 LHCGRP22888 699 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 OLFML2AQ68BL7 652 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 DPY19L2P1Q6NXN4 242 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 FOXR2Q6PJQ5 311 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 LINC00469Q8N7U9 141 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 OR6M1Q8NGM8 313 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 MBOAT4Q96T53 435 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 SPON2Q9BUD6 331 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 SUCNR1Q9BXA5 334 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 OR10A4Q9H209 315 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 RBM22Q9NW64 420 aaKnown RBP eCLIP10.81□□□□□ -0.68
PBX1-212ENST00000540236 A0A1W2PPK0 400 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 CD8B2A6NJW9 211 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 OR1I1O60431 355 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 GCATO75600 419 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 NFICP08651 508 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 CD8BP10966 210 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 WARSP23381 471 aaKnown RBP10.81□□□□□ -0.68
PBX1-212ENST00000540236 MLLT6P55198 1093 aaPredicted RBP10.81□□□□□ -0.68
PBX1-212ENST00000540236 BAK1Q16611 211 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 CTF1Q16619 201 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 TIFABQ6ZNK6 161 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 PRSS42Q7Z5A4 293 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 CFAP206Q8IYR0 622 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 KRTCAP2Q8N6L1 136 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 TCF25Q9BQ70 676 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 CCDC32Q9BV29 185 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 MIOSQ9NXC5 875 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 CNTN6Q9UQ52 1028 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 COX7A2P14406 83 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 GKP32189 559 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 CCR1P32246 355 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 SPAM1P38567 509 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 ITGA1P56199 1179 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 FCN2Q15485 313 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 MAP1SQ66K74 1059 aaPredicted RBP10.81□□□□□ -0.68
PBX1-212ENST00000540236 GPRIN3Q6ZVF9 776 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 FAM86B1Q8N7N1 296 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 MARC2Q969Z3 335 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 ZNF419Q96HQ0 510 aaPredicted RBP10.81□□□□□ -0.68
PBX1-212ENST00000540236 WDR77Q9BQA1 342 aaPredicted RBP10.81□□□□□ -0.68
PBX1-212ENST00000540236 PDGFCQ9NRA1 345 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 SLC13A4Q9UKG4 626 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 ANGPT4Q9Y264 503 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 BCL9O00512 1426 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 A0A0X1KG70 313 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 CBX4O00257 560 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 DGAT1O75907 488 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 KCNQ1P51787 676 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 MBTPS1Q14703 1052 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 SURF1Q15526 300 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 AAK1Q2M2I8 961 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 OTUD1Q5VV17 481 aaPredicted RBP10.81□□□□□ -0.68
PBX1-212ENST00000540236 NLRC3Q7RTR2 1065 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 MFSD4AQ8N468 514 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 COPS8Q99627 209 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 GHITMQ9H3K2 345 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 SDHAF2Q9NX18 166 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 FLRT1Q9NZU1 646 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 GTF2A1LQ9UNN4 478 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 SPATA31A6Q5VVP1 1343 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 A0A0G2JMP0 313 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 ICAM2P13598 275 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 PSMA6P60900 246 aaKnown RBP10.81□□□□□ -0.68
PBX1-212ENST00000540236 KIAA0319LQ8IZA0 1049 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 DAW1Q8N136 415 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 MFSD2AQ8NA29 543 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 SLC7A6Q92536 515 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 TTPALQ9BTX7 342 aa10.81□□□□□ -0.68
PBX1-212ENST00000540236 SPASTQ9UBP0 616 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms