RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SLC16A6O15403 523 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 POMCP01189 267 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 IGFBP5P24593 272 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 AVPR1AP37288 418 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 GDI2P50395 445 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 MAP2K6P52564 334 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 MYL6P60660 151 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 RPA4Q13156 261 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 DENND1BQ6P3S1 775 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 SNX20Q7Z614 316 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 CDYL2Q8N8U2 506 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 HMGCLL1Q8TB92 370 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 ZFPM2Q8WW38 1151 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 MTERF3Q96E29 417 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 AHCYL2Q96HN2 611 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 Q96MT0 163 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 GHITMQ9H3K2 345 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 PIF1Q9H611 641 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 LEF1Q9UJU2 399 aaPredicted RBP10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 SPATA2Q9UM82 520 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 TNPO3Q9Y5L0 923 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 DSCR3O14972 297 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 INPPL1O15357 1258 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 TSPAN12O95859 305 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 EOMESO95936 686 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 RAF1P04049 648 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 RRASP10301 218 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 TCF3P15923 654 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 FSHRP23945 695 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 RAPSNQ13702 412 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 ARHGAP15Q53QZ3 475 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 ZC3H12BQ5HYM0 836 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 FAM26DQ5JW98 314 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 RNF139Q8WU17 664 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 FAM129BQ96TA1 746 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 PCDHA9Q9Y5H5 950 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 ALG5Q9Y673 324 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 TCRBV5S1A1TA0A578 114 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 OR6C65A6NJZ3 312 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 NUPL2O15504 423 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 AHSGP02765 367 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 RB1P06400 928 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 ITKQ08881 620 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 ZACNQ401N2 412 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 ATAT1Q5SQI0 421 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 NUDT18Q6ZVK8 323 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 ZNF366Q8N895 744 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 CLRN3Q8NCR9 226 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 ZNF576Q9H609 170 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 EIF2B3Q9NR50 452 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 PTTG3PQ9NZH4 202 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 MAP10Q9P2G4 905 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 FBXL21Q9UKT6 434 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 KIAA1551Q9HCM1 1747 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 DOCK1Q14185 1865 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 WASHC1A8K0Z3 465 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 PROM1O43490 865 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 GPX3P22352 226 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 GLUD2P49448 558 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 DNAJB13P59910 316 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 CAPSQ13938 189 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 GRM3Q14832 879 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 RABL3Q5HYI8 236 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 BICRALQ6AI39 1079 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 RIMKLAQ8IXN7 391 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 WDR48Q8TAF3 677 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 YIPF5Q969M3 257 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 C19orf60Q96EN9 201 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 SLC47A1Q96FL8 570 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 LRCH3Q96II8 777 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 VAT1Q99536 393 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 MND1Q9BWT6 205 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 C1QTNF1Q9BXJ1 281 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 CEP41Q9BYV8 373 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 PIH1D1Q9NWS0 290 aaKnown RBP10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 MTMR10Q9NXD2 777 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 KCTD5Q9NXV2 234 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 CLDND1Q9NY35 253 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 ACTR10Q9NZ32 417 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 PHF11Q9UIL8 331 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 FAM240BA0A1B0GVZ2 78 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 SLC30A4O14863 429 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 GATCO43716 136 aaKnown RBP10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 LZTS3O60299 673 aaPredicted RBP10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 CXCL14O95715 111 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 TPOP07202 933 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 ACVR2AP27037 513 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 MEOX2P50222 304 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 RRAS2P62070 204 aaPredicted RBP10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 SIM2Q14190 667 aaPredicted RBP10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 SHHQ15465 462 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 WSCD2Q2TBF2 565 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 FBXO47Q5MNV8 452 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 KCNMB4Q86W47 210 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 PQLC3Q8N755 202 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 SLC37A3Q8NCC5 494 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 MYLPFQ96A32 169 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 DPCDQ9BVM2 203 aaPredicted RBP10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 NT5C1AQ9BXI3 368 aa10.6□□□□□ -0.71
CLSTN3-207ENST00000537408 PFDN2Q9UHV9 154 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms