RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 RNF170Q96K19 258 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 DMRTB1Q96MA1 342 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 UROC1Q96N76 676 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 SERPINB11Q96P15 392 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 ZNF382Q96SR6 550 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 BARD1Q99728 777 aaKnown RBP11.59□□□□□ -0.55
LTBR-203ENST00000441074 ZBED2Q9BTP6 218 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 NT5MQ9NPB1 228 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 NDFIP2Q9NV92 336 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 PAQR5Q9NXK6 330 aaPredicted RBP11.59□□□□□ -0.55
LTBR-203ENST00000441074 TRAPPC4Q9Y296 219 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 GPSM3Q9Y4H4 160 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 KCTD3Q9Y597 815 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 BPTFQ12830 3046 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 FAM220BPB1ANY3 271 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 H3BQ06 376 aaPredicted RBP11.58□□□□□ -0.56
LTBR-203ENST00000441074 AP3D1O14617 1153 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 INPPL1O15357 1258 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 TBX18O95935 607 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 AKT1P31749 480 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 UGT2B15P54855 530 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 RAD51Q06609 339 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 ELP6Q0PNE2 266 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 TBCEQ15813 527 aaPredicted RBP11.58□□□□□ -0.56
LTBR-203ENST00000441074 TIGD6Q17RP2 521 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 AAK1Q2M2I8 961 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 KIAA1614Q5VZ46 1190 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 ATG9BQ674R7 924 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 ZNF517Q6ZMY9 492 aaPredicted RBP11.58□□□□□ -0.56
LTBR-203ENST00000441074 CEP68Q76N32 757 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 ZNF438Q7Z4V0 828 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 SNX20Q7Z614 316 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 C14orf80Q86SX3 495 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 BPHLQ86WA6 291 aaPredicted RBP11.58□□□□□ -0.56
LTBR-203ENST00000441074 RAB43Q86YS6 212 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 ZDHHC21Q8IVQ6 265 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 MSRB3Q8IXL7 192 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 SIX5Q8N196 739 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 NETO1Q8TDF5 533 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 ZBTB18Q99592 522 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 NMUR1Q9HB89 426 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 PLSCR3Q9NRY6 295 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 SLC25A37Q9NYZ2 338 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 RIMKLBQ9ULI2 386 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 TBC1D24Q9ULP9 559 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.58□□□□□ -0.56
LTBR-203ENST00000441074 PCDHB8Q9UN66 801 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 PCDHGB2Q9Y5G2 931 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 HS3ST4Q9Y661 456 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 CHD9Q3L8U1 2897 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 CDC7O00311 574 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 MUSKO15146 869 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 UGT2B17O75795 530 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 GALTP07902 379 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 YES1P07947 543 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 ACRP10323 421 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 RHOQP17081 205 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 ITGA2P17301 1181 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 HOXA9P31269 272 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 IFNA8P32881 189 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 PIK3CBP42338 1070 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 PRIM2P49643 509 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 LIMK1P53667 647 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 SEMA3AQ14563 771 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 MAPKAPK3Q16644 382 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 TBRG1Q3YBR2 411 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 KIAA1841Q6NSI8 718 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 NRARPQ7Z6K4 114 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 CALHM3Q86XJ0 350 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 TEX26Q8N6G2 289 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 TADA1Q96BN2 335 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 TRIM43Q96BQ3 446 aaPredicted RBP11.58□□□□□ -0.56
LTBR-203ENST00000441074 RIPOR3Q96MK2 946 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 OR2A14Q96R47 310 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 PHOX2BQ99453 314 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 PITX2Q99697 317 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 TTYH2Q9BSA4 534 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 SP110Q9HB58 689 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 RPRD1BQ9NQG5 326 aaKnown RBP11.58□□□□□ -0.56
LTBR-203ENST00000441074 TBX21Q9UL17 535 aa11.58□□□□□ -0.56
LTBR-203ENST00000441074 POLR3HQ9Y535 204 aaPredicted RBP11.58□□□□□ -0.56
LTBR-203ENST00000441074 ERVH48-1M5A8F1 160 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 TNFRSF10BO14763 440 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 RHOBTB1O94844 696 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 OAZ2O95190 189 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 MMP2P08253 660 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 CSF2RAP15509 400 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 CYP2A7P20853 494 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 GRK5P34947 590 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 MLLT6P55198 1093 aaPredicted RBP11.57□□□□□ -0.56
LTBR-203ENST00000441074 ERVPABLB-1P60509 514 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 ITKQ08881 620 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 NR6A1Q15406 480 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 AP5B1Q2VPB7 878 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 SETMARQ53H47 684 aaPredicted RBP11.57□□□□□ -0.56
LTBR-203ENST00000441074 SIRPB2Q5JXA9 342 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 OR2T5Q6IEZ7 315 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 SCD5Q86SK9 330 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 NOXA1Q86UR1 476 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 CCDC71Q8IV32 467 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms