RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CEP76Q8TAP6 659 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 CLPTM1LQ96KA5 538 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 PKP4Q99569 1192 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 DCLRE1BQ9H816 532 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 WDR41Q9HAD4 459 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 ZIM2Q9NZV7 527 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 KLQ9UEF7 1012 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 MOSPD1Q9UJG1 213 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 SLC22A14Q9Y267 594 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 NDUFAF1Q9Y375 327 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 ANKRD12Q6UB98 2062 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 USP34Q70CQ2 3546 aa18.69■□□□□ 0.58
LMNB1-202ENST00000395354 KCNE1BA0A087WTH5 132 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 A0A1B0GVT2 93 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 TNFRSF10CO14798 259 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 KMOO15229 486 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 ENTPD5O75356 428 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 ACADLP28330 430 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 ACTR3P61158 418 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 LRP8Q14114 963 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 FZD2Q14332 565 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 LIPJQ5W064 366 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 REP15Q6BDI9 236 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 CRTC3Q6UUV7 619 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 BNC2Q6ZN30 1099 aaPredicted RBP18.68■□□□□ 0.58
LMNB1-202ENST00000395354 FNDC5Q8NAU1 212 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 SUMF1Q8NBK3 374 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 PCYOX1LQ8NBM8 494 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 WDR60Q8WVS4 1066 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 ROPN1LQ96C74 230 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 ARRDC1-AS1Q9H2J1 176 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 RMI1Q9H9A7 625 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 FGF22Q9HCT0 170 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 MRPL40Q9NQ50 206 aaKnown RBP18.68■□□□□ 0.58
LMNB1-202ENST00000395354 FAM86C1Q9NVL1 165 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 ZNF490Q9ULM2 529 aaPredicted RBP18.68■□□□□ 0.58
LMNB1-202ENST00000395354 PCDHGA5Q9Y5G8 931 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 DYTNA2CJ06 578 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 FBP2O00757 339 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 FUCA1P04066 466 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 BDKRB1P46663 353 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 DIO3P55073 304 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 NXPH1P58417 271 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 NR6A1Q15406 480 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 C1orf146Q5VVC0 180 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 BLOC1S3Q6QNY0 202 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 THOC6Q86W42 341 aaKnown RBP18.68■□□□□ 0.58
LMNB1-202ENST00000395354 GALNT13Q8IUC8 556 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 OR1E3Q8WZA6 343 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 TSACCQ96A04 125 aaPredicted RBP18.68■□□□□ 0.58
LMNB1-202ENST00000395354 NPAS2Q99743 824 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 ATG10Q9H0Y0 220 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 OR52A5Q9H2C5 316 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 ASIC5Q9NY37 505 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 GPRC5BQ9NZH0 403 aa18.68■□□□□ 0.58
LMNB1-202ENST00000395354 NOP53Q9NZM5 478 aaKnown RBP18.68■□□□□ 0.58
LMNB1-202ENST00000395354 NPIPB8E9PQR5 432 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 MRASO14807 208 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 CFIP05156 583 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 JUPP14923 745 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 IMPA1P29218 277 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 MPLP40238 635 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 NBL1P41271 181 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 SRP54P61011 504 aaKnown RBP18.67■□□□□ 0.58
LMNB1-202ENST00000395354 AP5B1Q2VPB7 878 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 RIPOR1Q6ZS17 1223 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 RD3Q7Z3Z2 195 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 PDZD3Q86UT5 571 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 OR9I1Q8NGQ6 314 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 OR9A1PQ8NGU1 263 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 STMN2Q93045 179 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 PYCR2Q96C36 320 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 SCARF2Q96GP6 870 aaPredicted RBP18.67■□□□□ 0.58
LMNB1-202ENST00000395354 ZNHIT2Q9UHR6 403 aa18.67■□□□□ 0.58
LMNB1-202ENST00000395354 PRSS38A1L453 326 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 PATE3B3GLJ2 98 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 FFAR3O14843 346 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 GPR42O15529 346 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 KCNJ13O60928 360 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 SLC22A3O75751 556 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 SLC16A8O95907 504 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 RETP07949 1114 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 PRPH2P23942 346 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 GNPDA1P46926 289 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 DMPKQ09013 629 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 EIF2B5Q13144 721 aaKnown RBP18.66■□□□□ 0.58
LMNB1-202ENST00000395354 NAE1Q13564 534 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 NFE2L1Q14494 772 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 ALG11Q2TAA5 492 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 TRIM61Q5EBN2 209 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 PARGQ86W56 976 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 MYLK4Q86YV6 388 aaPredicted RBP18.66■□□□□ 0.58
LMNB1-202ENST00000395354 JADE3Q92613 823 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 PNMA8BQ9ULN7 279 aaPredicted RBP18.66■□□□□ 0.58
LMNB1-202ENST00000395354 SUFUQ9UMX1 484 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 SLC6A14Q9UN76 642 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 HCN4Q9Y3Q4 1203 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 PRKAB1Q9Y478 270 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 SNX11Q9Y5W9 270 aa18.66■□□□□ 0.58
LMNB1-202ENST00000395354 FAM234BA2RU67 622 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms