RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CHRNB4P30926 498 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 ATAD3CQ5T2N8 411 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 GPR139Q6DWJ6 353 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 PTCH2Q9Y6C5 1203 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 LRRN3E7EW58 273 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 ZBED5Q49AG3 693 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 PMM1Q92871 262 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 LRRN3Q9H3W5 708 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 FAM230AA0A1W2PPH8 454 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 SSX5O60225 188 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 RPP40O75818 363 aaKnown RBP14.41□□□□□ -0.1
CCDC50-201ENST00000392455 PKMP14618 531 aaKnown RBP14.41□□□□□ -0.1
CCDC50-201ENST00000392455 SPAM1P38567 509 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 NCS1P62166 190 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 LCP2Q13094 533 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 C12orf29Q8N999 325 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 CSPG4P5Q96PW8 444 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 IMP3Q9NV31 184 aaKnown RBP14.41□□□□□ -0.1
CCDC50-201ENST00000392455 SPATA31D3P0C874 917 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 SPATA31D4Q6ZUB0 917 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 PARP8Q8N3A8 854 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 CDH22Q9UJ99 828 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 DNMT3AQ9Y6K1 912 aaPredicted RBP14.41□□□□□ -0.1
CCDC50-201ENST00000392455 DIP2CQ9Y2E4 1556 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 RAB19A4D1S5 217 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 ZNF773Q6PK81 442 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 GID4Q8IVV7 300 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 SLC35G5Q96KT7 338 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 ORAI3Q9BRQ5 295 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 HIPK2Q9H2X6 1198 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 RLIMQ9NVW2 624 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 NLGN3Q9NZ94 848 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 LIN52Q52LA3 116 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 RAB41Q5JT25 222 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 LYSMD3Q7Z3D4 306 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 OR5K1Q8NHB7 308 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 PURBQ96QR8 312 aaKnown RBP14.41□□□□□ -0.1
CCDC50-201ENST00000392455 OSBPL7Q9BZF2 842 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 ACP6Q9NPH0 428 aa14.41□□□□□ -0.1
CCDC50-201ENST00000392455 C20orf202A1L168 122 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 D6RAR5 112 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 PSMD9O00233 223 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 PI15O43692 258 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 ITGB1P05556 798 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 HOXA9P31269 272 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 CTHP32929 405 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 ACTR1BP42025 376 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 KIF18BQ86Y91 864 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 COQ8AQ8NI60 647 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 DUSP16Q9BY84 665 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 SEMA6CQ9H3T2 930 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 MALT1Q9UDY8 824 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 E7EQ34 232 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 HCRTR2O43614 444 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 MAGEA3P43357 314 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 ZNF81P51508 661 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 CNOT6Q9ULM6 557 aaKnown RBP14.4□□□□□ -0.1
CCDC50-201ENST00000392455 ADRB2P07550 413 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 MC4RP32245 332 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 PSPHP78330 225 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 BST1Q10588 318 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 MAB21L3Q8N8X9 362 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 OR5T2Q8NGG2 359 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 SIX4Q9UIU6 781 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 VWDEQ8N2E2 1590 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 J3QR89 54 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 LILRB5O75023 590 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 NFATC1O95644 943 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 CAPN3P20807 821 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 MATN1P21941 496 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 PPP5CP53041 499 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 NCEH1Q6PIU2 408 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 DCLRE1AQ6PJP8 1040 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 CATSPERGQ6ZRH7 1159 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 TSPAN33Q86UF1 283 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 CFAP52Q8N1V2 620 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 SHKBP1Q8TBC3 707 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 KCNJ9Q92806 393 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 SLC38A3Q99624 504 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 POLR2J3Q9H1A7 115 aaKnown RBP14.4□□□□□ -0.1
CCDC50-201ENST00000392455 KLF15Q9UIH9 416 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 SH2B3Q9UQQ2 575 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 PLLPQ9Y342 182 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 PPLO60437 1756 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 ACTL6BO94805 426 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 TPSB2P20231 275 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 CD52P31358 61 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 GRIK2Q13002 908 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 TPSAB1Q15661 275 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 TIGD2Q4W5G0 525 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 PLPP4Q5VZY2 271 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 APOBEC3HQ6NTF7 200 aaKnown RBP14.4□□□□□ -0.1
CCDC50-201ENST00000392455 ZBTB2Q8N680 514 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 CMKLR1Q99788 373 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 EGFL7Q9UHF1 273 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 MAP4K5Q9Y4K4 846 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 C13orf42A0A1B0GVH6 325 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 TSPAN15O95858 294 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 CCR8P51685 355 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 HSD17B7P56937 341 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms