RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 HMGCS1Q01581 520 aa19.13■□□□□ 0.65
TRIM58-201ENST00000366481 PARP15Q460N3 678 aa19.13■□□□□ 0.65
TRIM58-201ENST00000366481 RFTN2Q52LD8 501 aaPredicted RBP19.13■□□□□ 0.65
TRIM58-201ENST00000366481 RGMBQ6NW40 437 aa19.13■□□□□ 0.65
TRIM58-201ENST00000366481 Q6ZSR9 355 aa19.13■□□□□ 0.65
TRIM58-201ENST00000366481 FARSBQ9NSD9 589 aaKnown RBP19.13■□□□□ 0.65
TRIM58-201ENST00000366481 TOR4AQ9NXH8 423 aa19.13■□□□□ 0.65
TRIM58-201ENST00000366481 SAMHD1Q9Y3Z3 626 aaKnown RBP19.13■□□□□ 0.65
TRIM58-201ENST00000366481 RAI2Q9Y5P3 530 aa19.13■□□□□ 0.65
TRIM58-201ENST00000366481 KMOO15229 486 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 STX7O15400 261 aaKnown RBP19.12■□□□□ 0.65
TRIM58-201ENST00000366481 BNIP3LO60238 219 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 ALX3O95076 343 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 CA5AP35218 305 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 SOX6P35712 828 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 ZFP36L2P47974 494 aaKnown RBP19.12■□□□□ 0.65
TRIM58-201ENST00000366481 IDH2P48735 452 aaKnown RBP19.12■□□□□ 0.65
TRIM58-201ENST00000366481 DMC1Q14565 340 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 CDK10Q15131 360 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 CTSL3PQ5NE16 218 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 RTP2Q5QGT7 225 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 RAB43Q86YS6 212 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 NEDD4LQ96PU5 975 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 TSEN34Q9BSV6 310 aaKnown RBP19.12■□□□□ 0.65
TRIM58-201ENST00000366481 IGLV3-10A0A075B6K4 115 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 PABPN1LA6NDY0 278 aaKnown RBP19.12■□□□□ 0.65
TRIM58-201ENST00000366481 B3GALT4O96024 378 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 ZNF140P52738 457 aaPredicted RBP19.12■□□□□ 0.65
TRIM58-201ENST00000366481 TYSND1Q2T9J0 566 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 SPANXN4Q5MJ08 99 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 IFNL1Q8IU54 200 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 KBTBD8Q8NFY9 601 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 OR52E6Q96RD3 313 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 ARPC5LQ9BPX5 153 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 BTBD2Q9BX70 525 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 QPCTLQ9NXS2 382 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 TEKT2Q9UIF3 430 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 PCDHB9Q9Y5E1 797 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 NPPAP01160 153 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 PKMP14618 531 aaKnown RBP19.12■□□□□ 0.65
TRIM58-201ENST00000366481 HSPA7P48741 367 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 CAP1Q01518 475 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 IL18R1Q13478 541 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 PRSS36Q5K4E3 855 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 MBOAT1Q6ZNC8 495 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 CEP68Q76N32 757 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 BOCQ9BWV1 1114 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 BRINP2Q9C0B6 783 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 NSUN3Q9H649 340 aaKnown RBP19.12■□□□□ 0.65
TRIM58-201ENST00000366481 RUBCNLQ9H714 662 aa19.12■□□□□ 0.65
TRIM58-201ENST00000366481 TANC1Q9C0D5 1861 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 SCN4AP35499 1836 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 MICAL3Q7RTP6 2002 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 LCHNA4D1U4 455 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 C2orf81A6NN90 581 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 CTDSP2O14595 271 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 SLC16A6O15403 523 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 SCELO95171 688 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 OAZ2O95190 189 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 VIPP01282 170 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 CYBAP13498 195 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 HTR3AP46098 478 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 PPP3CCP48454 512 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 GRIK2Q13002 908 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 TUBA3EQ6PEY2 450 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 FAM151BQ6UXP7 276 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 STX19Q8N4C7 294 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 BEND7Q8N7W2 519 aaPredicted RBP19.11■□□□□ 0.65
TRIM58-201ENST00000366481 ZNF548Q8NEK5 533 aaPredicted RBP19.11■□□□□ 0.65
TRIM58-201ENST00000366481 DERL2Q9GZP9 239 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 VNN3Q9NY84 501 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 AGO1Q9UL18 857 aaKnown RBP19.11■□□□□ 0.65
TRIM58-201ENST00000366481 VPS4AQ9UN37 437 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 Q9Y3F1 56 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 NAALAD2Q9Y3Q0 740 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 RANBP2P49792 3224 aaKnown RBP19.11■□□□□ 0.65
TRIM58-201ENST00000366481 AOC2O75106 756 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 VPS26AO75436 327 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 TSPAN12O95859 305 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 RPLP0P05388 317 aaKnown RBP19.11■□□□□ 0.65
TRIM58-201ENST00000366481 IL2P60568 153 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 MVKQ03426 396 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 SLX4IPQ5VYV7 408 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 RHEBL1Q8TAI7 183 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 OMA1Q96E52 524 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 SNX18Q96RF0 628 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 TRIB3Q96RU7 358 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 GORASP2Q9H8Y8 452 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 FCF1Q9Y324 198 aaKnown RBP19.11■□□□□ 0.65
TRIM58-201ENST00000366481 PCDHGB1Q9Y5G3 927 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 PEX16Q9Y5Y5 336 aa19.11■□□□□ 0.65
TRIM58-201ENST00000366481 MTMR11A4FU01 709 aa19.1■□□□□ 0.65
TRIM58-201ENST00000366481 INSIG1O15503 277 aa19.1■□□□□ 0.65
TRIM58-201ENST00000366481 KLKB1P03952 638 aa19.1■□□□□ 0.65
TRIM58-201ENST00000366481 RPS17P08708 135 aaKnown RBP19.1■□□□□ 0.65
TRIM58-201ENST00000366481 PRKAR2AP13861 404 aaKnown RBP19.1■□□□□ 0.65
TRIM58-201ENST00000366481 ABRAXAS2Q15018 415 aa19.1■□□□□ 0.65
TRIM58-201ENST00000366481 Q6ZPB1 254 aaPredicted RBP19.1■□□□□ 0.65
TRIM58-201ENST00000366481 TRIM48Q8IWZ4 208 aa19.1■□□□□ 0.65
TRIM58-201ENST00000366481 CD200R1Q8TD46 325 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms