RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Gm20828J3KMI7 228 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Lrrc3P59034 257 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Tas2r16P59529 299 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 A1bgQ19LI2 512 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Zbtb2Q3V3W4 514 aaKnown RBP19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Defa17Q64016 82 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Defb14Q7TNV9 67 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Amigo1Q80ZD8 492 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Zfyve1Q810J8 777 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Fignl1Q8BPY9 683 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Vmn1r214Q8R279 367 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Slco1a5Q91YY5 670 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 TmlheQ91ZE0 421 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Fam174aQ9D3L0 190 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Cntd1Q9D995 334 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Nrg4Q9WTX4 115 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Cacna1eQ61290 2272 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Ccdc194A0A140LIT1 234 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Kif1cO35071 1100 aaKnown RBP19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 GfapP03995 430 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 BdnfP21237 249 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Pcmt1P23506 227 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Grik2P39087 908 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Man1a1P45700 655 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 ArsaP50428 506 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Polr2lP62876 67 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 ChatQ03059 641 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Hsf5Q5ND04 624 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Fam169aQ5XG69 665 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 InavaQ7TN12 663 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 PolbQ8K409 335 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Cd209eQ91ZW7 208 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Gstt3Q99L20 241 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Snrnp48Q9D361 337 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Glipr1l1Q9DAG6 236 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 KelQ9EQF2 713 aa19.86■□□□□ 0.77
Trim47-201ENSMUST00000021120 Igkv6-29A0A0G2JEI6 115 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Znf711A2ANX9 761 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Ttll9A2APC3 461 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Olfr620E9PZ66 313 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 2210016F16RikG3X8U3 338 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Smad6O35182 495 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 P01679 107 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Cpa3P15089 417 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Ido1P28776 407 aaKnown RBP19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Trim40Q3UWA4 246 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Ifi47Q61635 420 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Map3k10Q66L42 940 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Ddx51Q6P9R1 639 aaKnown RBP19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Nudcd1Q6PIP5 582 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 ChdhQ8BJ64 596 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Pabpc5Q8C7D3 381 aaKnown RBP19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 TbccQ8VCN9 341 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 ApofQ91V80 315 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 LipfQ9CPP7 395 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Efhd2Q9D8Y0 240 aaKnown RBP19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Hipk3Q9ERH7 1192 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Slc22a4Q9Z306 553 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Cacna1cQ01815 2139 aa19.85■□□□□ 0.77
Trim47-201ENSMUST00000021120 Igkv12-46A0A140T8P6 115 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Vmn2r118E9Q1C1 853 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Gm10715J3QP74 227 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Gm8011K7N6Y5 207 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Rnf43Q5NCP0 784 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Elavl3Q60900 367 aaKnown RBP19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 MelkQ61846 643 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Txndc15Q6P6J9 344 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Magee1Q6PCZ4 918 aaKnown RBP19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Ccdc85bQ6PDY0 202 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 RimklaQ6PFX8 380 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Amigo2Q80ZD9 519 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Sec22cQ8BXT9 303 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 BroxQ8K2Q7 411 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Olfr854Q8VFF1 315 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 EedQ921E6 441 aaKnown RBP19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Eif3fQ9DCH4 361 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Cyp2g1Q9WV19 494 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Cacna1dQ99246 2179 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Vmn2r-ps130A0A140T8U3 855 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 H2-M9O19442 342 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Pias3O54714 628 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 FesP16879 822 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Ldb1P70662 411 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Col6a2Q02788 1034 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Ppm1hQ3UYC0 513 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Zmat1Q3V0C1 714 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Six3Q62233 333 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Ces2bQ6PDB7 556 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Kiaa0895Q7TQE7 519 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Olfr1252Q7TQZ2 314 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Q8BP99 230 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Gm13199Q8C8E0 125 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Atat1Q8K341 421 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Papd4Q91YI6 484 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 L2hgdhQ91YP0 464 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Ddi1Q9DAF3 408 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Nufip1Q9QXX8 484 aa19.84■□□□□ 0.77
Trim47-201ENSMUST00000021120 Ajm1A2AJA9 974 aa19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Vmn2r85G3UW56 850 aa19.83■□□□□ 0.77
Trim47-201ENSMUST00000021120 Cyp21P03940 487 aa19.83■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms