RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 Q6ZS92 163 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 STRA8Q7Z7C7 330 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 TMEM126BQ8IUX1 230 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 NXPE1Q8N323 547 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 ENDOVQ8N8Q3 282 aaKnown RBP10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 OR8K5Q8NH50 307 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 TLCD1Q96CP7 247 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 SLC41A2Q96JW4 573 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZNF514Q96K75 400 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 PKNOX2Q96KN3 472 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 LRFN5Q96NI6 719 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 CPNE1Q99829 537 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 FAM167BQ9BTA0 163 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 CHST8Q9H2A9 424 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 FGF21Q9NSA1 209 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 SEMA5BQ9P283 1151 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 FKBPLQ9UIM3 349 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZNF180Q9UJW8 692 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 FBXO5Q9UKT4 447 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 PSAT1Q9Y617 370 aa10.96□□□□□ -0.65
TRAPPC4-213ENST00000533149 PCSK5Q92824 1860 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 SVILO95425 2214 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 IQANK1A0A1B0GTG1 560 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 FOXO6A8MYZ6 492 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 HMGB1P1B2RPK0 211 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 CD3EAPO15446 510 aaKnown RBP10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 SNRPB2P08579 225 aaKnown RBP10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 F7P08709 466 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 GP5P40197 560 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 HADHAP40939 763 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 ARL4DP49703 201 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 ATP1A4Q13733 1029 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 MYBPC3Q14896 1274 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 ZNF630Q2M218 657 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 LRRC66Q68CR7 880 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 BNC2Q6ZN30 1099 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 CUZD1Q86UP6 607 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 KMT5CQ86Y97 462 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 RAB43Q86YS6 212 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 DENND6AQ8IWF6 608 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 CNTN4Q8IWV2 1026 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 PARP9Q8IXQ6 854 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 RBM12BQ8IXT5 1001 aaKnown RBP10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 ZBTB2Q8N680 514 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 OTUD6BQ8N6M0 293 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 CLEC1AQ8NC01 280 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 GPR150Q8NGU9 434 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 OR4L1Q8NH43 312 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 CALML6Q8TD86 181 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 RSC1A1Q92681 617 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 INPP5DQ92835 1189 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 SCAMP4Q969E2 229 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 RELTQ969Z4 430 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 FER1L6-AS2Q96M78 137 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 IP6K3Q96PC2 410 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 C19orf43Q9BQ61 176 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 TRIM8Q9BZR9 551 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 STMN4Q9H169 189 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 NSMCE4AQ9NXX6 385 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 MARCH4Q9P2E8 410 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 TXNDC16Q9P2K2 825 aa10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 PCYT1BQ9Y5K3 369 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC4-213ENST00000533149 A0A1W2PPM1 405 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 H7C0S8 307 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 E2F3O00716 465 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 GRID2O43424 1007 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 IGHEP01854 428 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 AHSGP02765 367 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 SNRPAP09012 282 aaKnown RBP10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 EBLN1P0CF75 366 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 ZNF30P17039 623 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 HOXB4P17483 251 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 KRT15P19012 456 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 GABRB3P28472 473 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 HTR1EP28566 365 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 MC4RP32245 332 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 SPRP35270 261 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 STC1P52823 247 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 CSE1LP55060 971 aaKnown RBP10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 MAGOHP61326 146 aaKnown RBP10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 XIAPP98170 497 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 MPP1Q00013 466 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 BMPR2Q13873 1038 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 KCNAB1Q14722 419 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 MROH9Q5TGP6 573 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 ZNF470Q6ECI4 717 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 MRNIPQ6NTE8 343 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 AFTPHQ6ULP2 937 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 RFLNAQ6ZTI6 216 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 SDCCAG8Q86SQ7 713 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 LDB1Q86U70 411 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 CDH24Q86UP0 819 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 EXOC3L1Q86VI1 746 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 LMNTD2Q8IXW0 634 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 RAVER1Q8IY67 606 aaKnown RBP10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 C2CD4AQ8NCU7 369 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 GABPB2Q8TAK5 448 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 FAR1Q8WVX9 515 aa10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 RIOK2Q9BVS4 552 aaKnown RBP10.94□□□□□ -0.66
TRAPPC4-213ENST00000533149 OSGEPL1Q9H4B0 414 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms