RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 GFYI3L273 518 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PDLIM1O00151 329 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 EI24O14681 340 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PRMT3O60678 531 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 MOSPD3O75425 235 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 HPRP00739 348 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PDYNP01213 254 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RHOP08100 348 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SRPRAP08240 638 aaKnown RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 EPORP19235 508 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ITGB8P26012 769 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CALRP27797 417 aaKnown RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 MAP4P27816 1152 aaKnown RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CLDN8P56748 225 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ERVFC1P60507 584 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CSTF3Q12996 717 aaKnown RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PPIGQ13427 754 aaKnown RBP eCLIP9.3□□□□□ -0.922e-7■□□□□ 9.1
RAB3GAP1-205ENST00000489858 CPSF6Q16630 551 aaKnown RBP eCLIP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SLC5A9Q2M3M2 681 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PTCHD3Q3KNS1 767 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SLC36A3Q495N2 470 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RUNDC3AQ59EK9 446 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 NAIF1Q69YI7 327 aaPredicted RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ERAP2Q6P179 960 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TTC33Q6PID6 262 aaPredicted RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SUSD1Q6UWL2 747 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ISLR2Q6UXK2 745 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 DNAJC14Q6Y2X3 702 aaPredicted RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 B3GNT6Q6ZMB0 384 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CYP2U1Q7Z449 544 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 HSD11B1LQ7Z5J1 315 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RASGRP3Q8IV61 690 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RIMKLAQ8IXN7 391 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RAVER1Q8IY67 606 aaKnown RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 KLHDC8AQ8IYD2 350 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 MICU2Q8IYU8 434 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TMEM132CQ8N3T6 1108 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 DHRSXQ8N5I4 330 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 METTL25Q8N6Q8 603 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ZNF548Q8NEK5 533 aaPredicted RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 OR52E4Q8NGH9 312 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CSGALNACT1Q8TDX6 532 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ASZ1Q8WWH4 475 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CYGBQ8WWM9 190 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ATL1Q8WXF7 558 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 NCLNQ969V3 563 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 FAM162AQ96A26 154 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 FAM120BQ96EK7 910 aaKnown RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PAWRQ96IZ0 340 aaKnown RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 VPS35Q96QK1 796 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 OR52E6Q96RD3 313 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 GAS2L1Q99501 681 aaPredicted RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SEPHS2Q99611 448 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CPPED1Q9BRF8 314 aaPredicted RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 THUMPD3Q9BV44 507 aaKnown RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CHID1Q9BWS9 393 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ACPTQ9BZG2 426 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 KCNH6Q9H252 994 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PIF1Q9H611 641 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 GORASP2Q9H8Y8 452 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PCDH12Q9NPG4 1184 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TLR9Q9NR96 1032 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 VAPAQ9P0L0 249 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 DKK3Q9UBP4 350 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 IL36AQ9UHA7 158 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 NEUROG3Q9Y4Z2 214 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 V9GYQ6 96 aa9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 NUP210Q8TEM1 1887 aaPredicted RBP9.3□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ANKRD12Q6UB98 2062 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PIKFYVEQ9Y2I7 2098 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TRBV5-3A0A0A0MS03 114 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 EME2A4GXA9 379 aaPredicted RBP9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 HIDE1A8MVS5 230 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PLOD2O00469 737 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CXCR6O00574 342 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ZNF197O14709 1029 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ACOX3O15254 700 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 UGDHO60701 494 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ATG13O75143 517 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 LEFTY1O75610 366 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RFPL2O75678 378 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 OR6B1O95007 311 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 BMP10O95393 424 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 FGBP02675 491 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CATP04040 527 aaKnown RBP9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 POU2F2P09086 479 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 JUPP14923 745 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ITPKAP23677 461 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SOX11P35716 441 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 HALP42357 657 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 GJA8P48165 433 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ALDH3B2P48448 385 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 NRIP1P48552 1158 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PNLIPRP1P54315 467 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ST8SIA6P61647 398 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PLIN5Q00G26 463 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 IRF8Q02556 426 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 UBE3AQ05086 875 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 LSAMPQ13449 338 aa9.29□□□□□ -0.92
RAB3GAP1-205ENST00000489858 DAG1Q14118 895 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms