RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 LINGO1Q96FE5 620 aa3.42□□□□□ -1.86
HFM1-208ENST00000488023 RITA1Q96K30 269 aa3.42□□□□□ -1.86
HFM1-208ENST00000488023 RAD9AQ99638 391 aa3.42□□□□□ -1.86
HFM1-208ENST00000488023 SEMA4CQ9C0C4 833 aa3.42□□□□□ -1.86
HFM1-208ENST00000488023 SLC39A8Q9C0K1 460 aa3.42□□□□□ -1.86
HFM1-208ENST00000488023 SEMA6AQ9H2E6 1030 aa3.42□□□□□ -1.86
HFM1-208ENST00000488023 SLA2Q9H6Q3 261 aa3.42□□□□□ -1.86
HFM1-208ENST00000488023 RMND5AQ9H871 391 aa3.42□□□□□ -1.86
HFM1-208ENST00000488023 MAGEF1Q9HAY2 307 aa3.42□□□□□ -1.86
HFM1-208ENST00000488023 PPANQ9NQ55 473 aaKnown RBP3.42□□□□□ -1.86
HFM1-208ENST00000488023 DDX18Q9NVP1 670 aaKnown RBP3.42□□□□□ -1.86
HFM1-208ENST00000488023 CNOT2Q9NZN8 540 aaKnown RBP3.42□□□□□ -1.86
HFM1-208ENST00000488023 CHRNA9Q9UGM1 479 aa3.42□□□□□ -1.86
HFM1-208ENST00000488023 PADI3Q9ULW8 664 aa3.42□□□□□ -1.86
HFM1-208ENST00000488023 PCDHA12Q9UN75 941 aa3.42□□□□□ -1.86
HFM1-208ENST00000488023 TRIM49BA6NDI0 452 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 ZSCAN5BA6NJL1 495 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 TARM1B6A8C7 271 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 PRSS46E5RG02 174 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 MAGEB3O15480 346 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 CLDN3O15551 220 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 RAD51DO75771 328 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 VNN2O95498 520 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 CXCL10P02778 98 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 CELA2AP08217 269 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 NHLRC4P0CG21 123 aaPredicted RBP3.41□□□□□ -1.86
HFM1-208ENST00000488023 THRBP10828 461 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 EPB41P11171 864 aaKnown RBP3.41□□□□□ -1.86
HFM1-208ENST00000488023 CASQ1P31415 396 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 IER3P46695 156 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 OR3A1P47881 315 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 SLC6A12P48065 614 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 CSNK2A1P68400 391 aaPredicted RBP3.41□□□□□ -1.86
HFM1-208ENST00000488023 TFF2Q03403 129 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 ARHGAP1Q07960 439 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 PDZK1IP1Q13113 114 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 SNTB2Q13425 540 aaKnown RBP3.41□□□□□ -1.86
HFM1-208ENST00000488023 SNX1Q13596 522 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 VEZF1Q14119 521 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 NEDD9Q14511 834 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 NADK2Q4G0N4 442 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 KCTD21Q4G0X4 260 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 DCST1Q5T197 706 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 CCNYL2Q5T2Q4 361 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 FAM46CQ5VWP2 391 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 SUSD4Q5VX71 490 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 TMEM26Q6ZUK4 368 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 GPSM1Q86YR5 675 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 FOXRED2Q8IWF2 684 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 ZCCHC7Q8N3Z6 543 aaKnown RBP3.41□□□□□ -1.86
HFM1-208ENST00000488023 PCDH20Q8N6Y1 951 aaKnown RBP3.41□□□□□ -1.86
HFM1-208ENST00000488023 ACVR1CQ8NER5 493 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 CSNK2A3Q8NEV1 391 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 OR2AK2Q8NG84 335 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 OR56B1Q8NGI3 324 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 OR52B4Q8NGK2 314 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 SPATA3Q8NHX4 192 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 METTL21AQ8WXB1 218 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 FAM213AQ9BRX8 229 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 ZNF416Q9BWM5 594 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 B3GNT4Q9C0J1 378 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 SIRPDQ9H106 197 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 TFB2MQ9H5Q4 396 aaKnown RBP3.41□□□□□ -1.86
HFM1-208ENST00000488023 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.41□□□□□ -1.863e-12■■■■■ 104.8
HFM1-208ENST00000488023 NPAP1Q9NZP6 1156 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 STK26Q9P289 416 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 KLHL13Q9P2N7 655 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 FOXA2Q9Y261 457 aaPredicted RBP3.41□□□□□ -1.86
HFM1-208ENST00000488023 TMED5Q9Y3A6 229 aa3.41□□□□□ -1.86
HFM1-208ENST00000488023 CTAGE15A4D2H0 777 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 C2CD4BA6NLJ0 364 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 STMND1H3BQB6 276 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 J3KR12 359 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 SMIM22K7EJ46 135 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 HS3ST1O14792 307 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 ANKRD28O15084 1053 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 SLC22A2O15244 555 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 CHADO15335 359 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 ADAM12O43184 909 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 ATP6V1G1O75348 118 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 DDNO94850 711 aaPredicted RBP3.4□□□□□ -1.86
HFM1-208ENST00000488023 EPN2O95208 641 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 IGHV2-70P01814 119 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 MMP3P08254 477 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 CTAGE8P0CG41 777 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 DLATP10515 647 aaKnown RBP3.4□□□□□ -1.86
HFM1-208ENST00000488023 ENO3P13929 434 aaPredicted RBP3.4□□□□□ -1.86
HFM1-208ENST00000488023 BDKRB2P30411 391 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 CDX1P47902 265 aaPredicted RBP3.4□□□□□ -1.86
HFM1-208ENST00000488023 SLC9A3P48764 834 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 CLCNKAP51800 687 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 CDH12P55289 794 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 COG7P83436 770 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 DSC1Q08554 894 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 PNRC1Q12796 327 aaPredicted RBP3.4□□□□□ -1.86
HFM1-208ENST00000488023 PLA2G7Q13093 441 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 IFT88Q13099 833 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 CUL3Q13618 768 aa3.4□□□□□ -1.86
HFM1-208ENST00000488023 TSTA3Q13630 321 aaPredicted RBP3.4□□□□□ -1.86
HFM1-208ENST00000488023 GK2Q14410 553 aaPredicted RBP3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms