RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PCDHB7Q9Y5E2 793 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 PDE4DIPQ5VU43 2346 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 MYO1GB0I1T2 1018 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 ANKRD66B4E2M5 251 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 RGS10O43665 173 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 SSX4O60224 188 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 SCELO95171 688 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 RPLP2P05387 115 aaKnown RBP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 HOXA9P31269 272 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 AKT1P31749 480 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 GRK3P35626 688 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 TRAF3Q13114 568 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 CAPN13Q6MZZ7 669 aaPredicted RBP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 CXorf57Q6NSI4 855 aaKnown RBP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 AFTPHQ6ULP2 937 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 RNF180Q86T96 592 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 HIPK1Q86Z02 1210 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 ZDHHC21Q8IVQ6 265 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 FBXO22Q8NEZ5 403 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 ELMO1Q92556 727 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 PEX13Q92968 403 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 BOCQ9BWV1 1114 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 NSUN3Q9H649 340 aaKnown RBP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 IPPKQ9H8X2 491 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 FCF1Q9Y324 198 aaKnown RBP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 TPRKBQ9Y3C4 175 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 GMPPBQ9Y5P6 360 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 PABPN1LA6NDY0 278 aaKnown RBP12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 C2orf81A6NN90 581 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 hCG_2039718K7EN88 272 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 FAM20BO75063 409 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 VPS26AO75436 327 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 PGLSO95336 258 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 LPOP22079 712 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 HSPA7P48741 367 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 CDH4P55283 916 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 IL18R1Q13478 541 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 GTF2H2Q13888 395 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 C5orf22Q49AR2 442 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 ZC3H12BQ5HYM0 836 aaKnown RBP12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 GTF2H2CQ6P1K8 395 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 SHQ1Q6PI26 577 aaKnown RBP12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 WFDC5Q8TCV5 224 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 SLC22A12Q96S37 553 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 INPP5KQ9BT40 448 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 SP140LQ9H930 580 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 PCDHB9Q9Y5E1 797 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 A0A096LPI6 279 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 A0A1W2PQ45 241 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 A0A1W2PQY0 241 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 OR2A25A4D2G3 310 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 TBKBP1A7MCY6 615 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 PER2O15055 1255 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 ZNF682O95780 498 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 MYCP01106 439 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 RETP07949 1114 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 C21orf33P30042 268 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 GZMMP51124 257 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 CLPPQ16740 277 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 CLDN19Q8N6F1 224 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 ZNF486Q96H40 463 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 PYURFQ96I23 114 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 OR52E6Q96RD3 313 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 VN1R3Q9BXE9 311 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 DPY30Q9C005 99 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 AMBNQ9NP70 447 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 TMEM45AQ9NWC5 275 aa12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 ABT1Q9ULW3 272 aaKnown RBP12.97□□□□□ -0.33
PDZRN3-208ENST00000479530 TRBV5-3A0A0A0MS03 114 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 NDUFB5O43674 189 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 PCDHGA12O60330 932 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 WBP4O75554 376 aaKnown RBP12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 DBTP11182 482 aaKnown RBP12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 HMGA1P17096 107 aaKnown RBP12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 GRK5P34947 590 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 CA8P35219 290 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 CDKN2CP42773 168 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 SLC11A2P49281 568 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 ZXDBP98169 803 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 CREMQ03060 361 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 TWF1Q12792 350 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 ZNF177Q13360 481 aaPredicted RBP12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 MAD2L1BPQ15013 274 aaPredicted RBP12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 ZNF404Q494X3 552 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 Q6ZPB1 254 aaPredicted RBP12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 VASH1Q7L8A9 365 aaPredicted RBP12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 PRSS48Q7RTY5 328 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 NLGN4XQ8N0W4 816 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 SVOPQ8N4V2 548 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 CELF2-AS1Q8N7Q2 184 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 LKAAEAR1Q8TD35 194 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 TTPALQ9BTX7 342 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 TM6SF2Q9BZW4 377 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 NDEL1Q9GZM8 345 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 SIRT5Q9NXA8 310 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 ELOVL2Q9NXB9 296 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 SCN3BQ9NY72 215 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms