RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 HRH2P25021 359 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 GLRBP48167 497 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 ALDH18A1P54886 795 aaKnown RBP12.18□□□□□ -0.46
SND1-209ENST00000470723 INHBCP55103 352 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 GFERP55789 205 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 PPP1CAP62136 330 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 ABATP80404 500 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 NAE1Q13564 534 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 PCBP2Q15366 365 aaKnown RBP eCLIP12.18□□□□□ -0.467e-8■■■■□ 21.3
SND1-209ENST00000470723 KIF26BQ2KJY2 2108 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 CCDC153Q494R4 210 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 HES3Q5TGS1 186 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 CAPN13Q6MZZ7 669 aaPredicted RBP12.18□□□□□ -0.46
SND1-209ENST00000470723 LCTLQ6UWM7 567 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 MBOAT1Q6ZNC8 495 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 SYTL1Q8IYJ3 562 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 UBTD2Q8WUN7 234 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 TLCD1Q96CP7 247 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 LIN37Q96GY3 246 aaPredicted RBP12.18□□□□□ -0.46
SND1-209ENST00000470723 TSNARE1Q96NA8 513 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 TGM7Q96PF1 710 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 TRAPPC9Q96Q05 1148 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 DEPDC7Q96QD5 511 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 MAP3K3Q99759 626 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 C1QTNF3Q9BXJ4 246 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 ZNF768Q9H5H4 540 aaKnown RBP12.18□□□□□ -0.46
SND1-209ENST00000470723 UTP6Q9NYH9 597 aaKnown RBP12.18□□□□□ -0.46
SND1-209ENST00000470723 BTRCQ9Y297 605 aa12.18□□□□□ -0.46
SND1-209ENST00000470723 IGHV5-51A0A0C4DH38 117 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 ISM1B1AKI9 464 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 STX16-NPEPL1H3BU86 382 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 UBXN8O00124 270 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 COPEO14579 308 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 STX16O14662 325 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 ATP8B1O43520 1251 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 KIF1CO43896 1103 aaKnown RBP12.17□□□□□ -0.46
SND1-209ENST00000470723 PLIN3O60664 434 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 ZBTB11O95625 1053 aaPredicted RBP12.17□□□□□ -0.46
SND1-209ENST00000470723 PROCP04070 461 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 JUPP14923 745 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 CREB1P16220 341 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 NELFEP18615 380 aaKnown RBP12.17□□□□□ -0.46
SND1-209ENST00000470723 SLC18A1P54219 525 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 E2F2Q14209 437 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 SF1Q15637 639 aaKnown RBP12.17□□□□□ -0.46
SND1-209ENST00000470723 PTCHD3Q3KNS1 767 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 CCDC157Q569K6 752 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 AGBL2Q5U5Z8 902 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 CACHD1Q5VU97 1274 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 IRGCQ6NXR0 463 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 FRA10AC1Q70Z53 315 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 B3GNT8Q7Z7M8 397 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 SRRM1Q8IYB3 904 aaKnown RBP12.17□□□□□ -0.46
SND1-209ENST00000470723 C4orf33Q8N1A6 199 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 D2HGDHQ8N465 521 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 CHCHD4Q8N4Q1 142 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 C2orf73Q8N5S3 287 aaPredicted RBP12.17□□□□□ -0.46
SND1-209ENST00000470723 ABHD11Q8NFV4 315 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 OR2L3Q8NG85 312 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 OR4K1Q8NGD4 311 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 OR4K3Q96R72 315 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 HAUS8Q9BT25 410 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 CAPS2Q9BXY5 557 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 CD244Q9BZW8 370 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 ATG10Q9H0Y0 220 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 STMN4Q9H169 189 aaPredicted RBP12.17□□□□□ -0.46
SND1-209ENST00000470723 CNOT10Q9H9A5 744 aaKnown RBP12.17□□□□□ -0.46
SND1-209ENST00000470723 ZNF446Q9NWS9 450 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 CD274Q9NZQ7 290 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 XPR1Q9UBH6 696 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 TNPO3Q9Y5L0 923 aaKnown RBP12.17□□□□□ -0.46
SND1-209ENST00000470723 SEC16AO15027 2179 aa12.17□□□□□ -0.46
SND1-209ENST00000470723 A0A0J9YY10 115 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 GSAPA4D1B5 854 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 PABPN1LA6NDY0 278 aaKnown RBP12.16□□□□□ -0.46
SND1-209ENST00000470723 SLC9B1P1A6NJY1 282 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 G3V2L1 256 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 DLX3O60479 287 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 CSO75390 466 aaKnown RBP12.16□□□□□ -0.46
SND1-209ENST00000470723 STK16O75716 305 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 SASH3O75995 380 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 MPSTP25325 297 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 RPA3P35244 121 aaPredicted RBP12.16□□□□□ -0.46
SND1-209ENST00000470723 GRIA3P42263 894 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 CASP2P42575 452 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 PRKAA2P54646 552 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 HSD11B2P80365 405 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 NFKB2Q00653 900 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 TARDBPQ13148 414 aaKnown RBP eCLIP12.16□□□□□ -0.461e-7■■■■■ 27.3
SND1-209ENST00000470723 EIF3IQ13347 325 aaKnown RBP12.16□□□□□ -0.46
SND1-209ENST00000470723 CAMK2BQ13554 666 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 NAA25Q14CX7 972 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 SETDB1Q15047 1291 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 KIAA1614Q5VZ46 1190 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 ICE2Q659A1 982 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 ZNF425Q6IV72 752 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 C16orf46Q6P387 395 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 FBXO42Q6P3S6 717 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 FIGLAQ6QHK4 219 aa12.16□□□□□ -0.46
SND1-209ENST00000470723 SUSD1Q6UWL2 747 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms