RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 CACHD1Q5VU97 1274 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 PRAMEF13Q5VWM6 474 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 CAPN13Q6MZZ7 669 aaPredicted RBP14.82□□□□□ -0.04
CNOT9-205ENST00000433439 TMEM71Q6P5X7 295 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 LRRC56Q8IYG6 542 aaPredicted RBP14.82□□□□□ -0.04
CNOT9-205ENST00000433439 SNX31Q8N9S9 440 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 SLC22A18Q96BI1 424 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 ZDHHC12Q96GR4 267 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 MAP3K3Q99759 626 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 SH3GL2Q99962 352 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 TMEM79Q9BSE2 394 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 POMT2Q9UKY4 750 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 SLC22A14Q9Y267 594 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 KLHL20Q9Y2M5 609 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 PLLPQ9Y342 182 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 PCDHB11Q9Y5F2 797 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 ENTPD2Q9Y5L3 495 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 ACTL7BQ9Y614 415 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 ZFHX4Q86UP3 3567 aa14.82□□□□□ -0.04
CNOT9-205ENST00000433439 A0A1W2PPV9 198 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 A8MT66 165 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 MATN2O00339 956 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 NTN3O00634 580 aaPredicted RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 TYROBPO43914 113 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 DLX3O60479 287 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 SIX3O95343 332 aaPredicted RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 CPA3P15088 417 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 SEPHS1P49903 392 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 ALDH18A1P54886 795 aaKnown RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 YBX1P67809 324 aaKnown RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 SETDB1Q15047 1291 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 HES3Q5TGS1 186 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 WDR74Q6RFH5 385 aaPredicted RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 SPESP1Q6UW49 350 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 ZNF574Q6ZN55 896 aaPredicted RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 RBM44Q6ZP01 1051 aaKnown RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 RAB44Q7Z6P3 723 aaPredicted RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 THOC6Q86W42 341 aaKnown RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 TMEM151AQ8N4L1 468 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 OR56A3Q8NH54 315 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 WDR48Q8TAF3 677 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 HMGCLL1Q8TB92 370 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 MGARPQ8TDB4 240 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 CCDC74BQ96LY2 380 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 OR2A14Q96R47 310 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 SEMA6CQ9H3T2 930 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 CNOT10Q9H9A5 744 aaKnown RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 MLXIPLQ9NP71 852 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 ACSS2Q9NR19 701 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 INTS7Q9NVH2 962 aaKnown RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 MID2Q9UJV3 735 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 PTBP2Q9UKA9 531 aaKnown RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 TMCO1Q9UM00 188 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 ASB1Q9Y576 335 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 ANGPTL3Q9Y5C1 460 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 KMT2BQ9UMN6 2715 aaPredicted RBP14.81□□□□□ -0.04
CNOT9-205ENST00000433439 DNAH14Q0VDD8 3507 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 WDR87Q6ZQQ6 2873 aa14.81□□□□□ -0.04
CNOT9-205ENST00000433439 TMEM120BA0PK00 339 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 TARM1B6A8C7 271 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 STK16O75716 305 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 MT-CO3P00414 261 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 ATP5F1P24539 256 aaPredicted RBP14.8□□□□□ -0.04
CNOT9-205ENST00000433439 EEF1DP29692 281 aaKnown RBP14.8□□□□□ -0.04
CNOT9-205ENST00000433439 CMPK1P30085 196 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 LSSP48449 732 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 ARL4DP49703 201 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 PUM1Q14671 1186 aaKnown RBP eCLIP14.8□□□□□ -0.04
CNOT9-205ENST00000433439 CDKL4Q5MAI5 379 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 KIAA1614Q5VZ46 1190 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 ZYG11AQ6WRX3 759 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 ADCK2Q7Z695 626 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 B3GNT8Q7Z7M8 397 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 RCBTB1Q8NDN9 531 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 OR4D9Q8NGE8 314 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 OR2A1Q8NGT9 310 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 DPYSL5Q9BPU6 564 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 PAIP2Q9BPZ3 127 aaKnown RBP14.8□□□□□ -0.04
CNOT9-205ENST00000433439 CD244Q9BZW8 370 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 SSU72Q9NP77 194 aaKnown RBP14.8□□□□□ -0.04
CNOT9-205ENST00000433439 MRPS30Q9NP92 439 aaKnown RBP14.8□□□□□ -0.04
CNOT9-205ENST00000433439 OPTCQ9UBM4 332 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 EPHA6Q9UF33 1036 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 DYRK1BQ9Y463 629 aa14.8□□□□□ -0.04
CNOT9-205ENST00000433439 IGHV5-10-1A0A0J9YXX1 117 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 A0A0J9YY10 115 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 WDR91A4D1P6 747 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 TLCD2A6NGC4 264 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 SLC9B1P1A6NJY1 282 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 HMGB1P1B2RPK0 211 aaPredicted RBP14.79□□□□□ -0.04
CNOT9-205ENST00000433439 G3V2L1 256 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 ATP8B1O43520 1251 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 PRICKLE3O43900 615 aaPredicted RBP14.79□□□□□ -0.04
CNOT9-205ENST00000433439 KLK8O60259 260 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 IPO13O94829 963 aaKnown RBP14.79□□□□□ -0.04
CNOT9-205ENST00000433439 C9P02748 559 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 CDK4P11802 303 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 CCND1P24385 295 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 ARL1P40616 181 aaPredicted RBP14.79□□□□□ -0.04
CNOT9-205ENST00000433439 SLC6A12P48065 614 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms