RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 STX5Q13190 355 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 ORC1Q13415 861 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 ARTNQ5T4W7 220 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 CES5AQ6NT32 575 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 PAMR1Q6UXH9 720 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 OVCH2Q7RTZ1 564 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 MIB1Q86YT6 1006 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 CYP4Z2PQ8N1L4 340 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 KLHL36Q8N4N3 616 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 MINDY1Q8N5J2 469 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 GDPD1Q8N9F7 314 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 FBXO30Q8TB52 745 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 RNF31Q96EP0 1072 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 FRMD6Q96NE9 622 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 TRNT1Q96Q11 434 aaKnown RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 TTLL2Q9BWV7 592 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 PRKD2Q9BZL6 878 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 LMAN2LQ9H0V9 348 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 SMOC2Q9H3U7 446 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 MROH8Q9H579 483 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 BIN3Q9NQY0 253 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 EXD2Q9NVH0 621 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 INTS10Q9NVR2 710 aaKnown RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 BABAM2Q9NXR7 383 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 ABCG2Q9UNQ0 655 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 SESN1Q9Y6P5 492 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 hCG_1807616A0A1W2PRN6 198 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 SLC22A23A1A5C7 686 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 TTC24A2A3L6 582 aaPredicted RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 MFSD2BA6NFX1 497 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 ASB14A6NK59 587 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 EFCAB7A8K855 629 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 PTGES3LE9PB15 166 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 SMLR1H3BR10 107 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 PCDH17O14917 1159 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 CA12O43570 354 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 HSPA4LO95757 839 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 RAF1P04049 648 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 ACSM4P0C7M7 580 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 SMIM6P0DI80 62 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 MYCLP12524 364 aaPredicted RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 TFE3P19532 575 aaPredicted RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 PSMB9P28065 219 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 HOXC8P31273 242 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 SDC4P31431 198 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 BMP8BP34820 402 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 ASMTP46597 345 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 RPL14P50914 215 aaKnown RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 STAT5BP51692 787 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 TBX4P57082 545 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 RAC1P63000 192 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 CAMK1Q14012 370 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 DSG2Q14126 1118 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 PTPRRQ15256 657 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 MEP1AQ16819 746 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 HSDL1Q3SXM5 330 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 CDKL4Q5MAI5 379 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 SYT6Q5T7P8 510 aaPredicted RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 FUT10Q6P4F1 479 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 POMZP3Q6PJE2 187 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 BMP8AQ7Z5Y6 402 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 MICALL2Q8IY33 904 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 VWA5B2Q8N398 1253 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 LNX2Q8N448 690 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 FBLIM1Q8WUP2 373 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 DEPDC1BQ8WUY9 529 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 PCNPQ8WW12 178 aaKnown RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 REPS1Q96D71 796 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 CDCA5Q96FF9 252 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 FAM84AQ96KN4 292 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 HOPXQ9BPY8 73 aaPredicted RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 FAM126AQ9BYI3 521 aaPredicted RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 ZCCHC2Q9C0B9 1178 aaKnown RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 OSBPL2Q9H1P3 480 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 TFB2MQ9H5Q4 396 aaKnown RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 ZBTB20Q9HC78 741 aaPredicted RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 ERVK13-1Q9NX77 482 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 MLXQ9UH92 298 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 INTS6Q9UL03 887 aaKnown RBP6.49□□□□□ -1.37
ZNF540-201ENST00000316433 MGAT4BQ9UQ53 548 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 TRAPPC4Q9Y296 219 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 LYVE1Q9Y5Y7 322 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 THSD7BQ9C0I4 1608 aa6.49□□□□□ -1.37
ZNF540-201ENST00000316433 A0A0U1RQS6 177 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TMEM238LA0A1B0GVL6 79 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 KCNU1A8MYU2 1149 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 KRBOX1C9JBD0 128 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 H7C2Y5 167 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 SLC1A7O00341 560 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 PIRO00625 290 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TPP1O14773 563 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 PCDHGA12O60330 932 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 DPM1O60762 260 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 CNTN5O94779 1100 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 METTL18O95568 372 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 DHFRP00374 187 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 IFNA7P01567 189 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 RPLP2P05387 115 aaKnown RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 GPIP06744 558 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 SBK3P0C264 359 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms