RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Sppl2bQ3TD49 578 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Spata6Q3U6K5 488 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Naf1Q3UMQ8 489 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Klf4Q60793 483 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Ddx4Q61496 702 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Serpina3aQ6P4P1 422 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Scn4bQ7M729 228 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Wdr47Q8CGF6 920 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 MfrpQ8K480 584 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Nipal2Q91WC7 383 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Pcdhga11Q91XY8 933 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Gjd3Q91YD1 278 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Prmt3Q922H1 532 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Marc2Q922Q1 338 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 ArhgdiaQ99PT1 204 aaKnown RBP13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Ska2Q9CR46 120 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Ndufv2Q9D6J6 248 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Fezf2Q9ESP5 455 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 GabrqQ9JLF1 638 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Rad9aQ9Z0F6 389 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 HephQ9Z0Z4 1157 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Ep400Q8CHI8 3072 aaKnown RBP13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 SelenovD3YXG1 328 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Vmn1r184E9Q2N4 314 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Hsd17b10O08756 261 aaKnown RBP13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Rgs4O08899 205 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 PigfO09101 219 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Grk4O70291 574 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Vti1bO88384 232 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Fcgr2P08101 330 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Ptpn6P29351 595 aaKnown RBP13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Kcnj8P97794 424 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 TekQ02858 1122 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 A630001G21RikQ3UTB2 229 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 MagixQ4KL35 324 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Dcdc2Q5DU00 475 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Slc17a4Q5NCM1 492 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Myo1dQ5SYD0 1006 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Pramel7Q810Y8 479 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Tigd4Q8BUZ3 513 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Cfap61Q8CEL2 1252 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Adnp2Q8CHC8 1165 aaKnown RBP13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Prkd3Q8K1Y2 889 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 GabrpQ8QZW7 440 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Vmn1r38Q8R2E1 302 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Fam20bQ8VCS3 409 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Ankrd49Q8VE42 238 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Elp2Q91WG4 831 aaKnown RBP13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Kiaa2013Q91X21 634 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Asb9Q91ZT8 290 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Prl7c1Q9CRB5 251 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 NarfQ9CYQ7 462 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Zfp773Q9CZ29 471 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Tex47Q9D5W8 253 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Rhobtb1Q9DAK3 695 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 FancgQ9EQR6 623 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Prg3Q9JL95 222 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Upk1bQ9Z2C6 260 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Sept5Q9Z2Q6 369 aa13.24□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Fam136b-psA0A140T8T1 138 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 TprnA2AI08 749 aaKnown RBP13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Zfp738B8JJX8 793 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 PbsnO08976 174 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Aldh1a1P24549 501 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Slc6a11P31650 627 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Rps14P62264 151 aaKnown RBP13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 NficP70255 439 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Scn1bP97952 218 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 FukQ7TMC8 1090 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Trim36Q80WG7 729 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Eme1Q8BJW7 570 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Ndrg4Q8BTG7 352 aaKnown RBP13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Aifm2Q8BUE4 373 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Smco1Q8CEZ1 214 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Rnf219Q8K2Y0 722 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Mta1Q8K4B0 715 aaKnown RBP13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Ttc4Q8R3H9 386 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Socs7Q8VHQ2 579 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Mrps5Q99N87 432 aaKnown RBP13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Ranbp3Q9CT10 491 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Fam122aQ9DB52 284 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Aff4Q9ESC8 1160 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Nectin3Q9JLB9 549 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Wdr81Q5ND34 1934 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Gm37596A0A0A6YXL2 336 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Olfr566A0A1B0GST0 319 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 BC024063A0A1W2P7G7 749 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Veph1A1A535 833 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Gm4450E9Q007 373 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Vmn2r21K7N6Y7 853 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Vmn2r20L7N2B1 853 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Sod3O09164 251 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Il1aP01582 270 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 SpnP15702 395 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Folr1P35846 255 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Aff3P51827 1254 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Idh2P54071 452 aaKnown RBP13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 SgcdP82347 289 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 Cnpy1Q4VAB4 94 aa13.23□□□□□ -0.29
Clcn4-203ENSMUST00000210061 IspdQ5RJG7 447 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms