RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 NMD3Q96D46 503 aaKnown RBP18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 RAD9AQ99638 391 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 MBD1Q9UIS9 605 aaPredicted RBP18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 WNT6Q9Y6F9 365 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 CROCCQ5TZA2 2017 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 TRBV5-3A0A0A0MS03 114 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 MTX2O75431 263 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 ETV3P41162 512 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 CHIT1Q13231 466 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 PPIGQ13427 754 aaKnown RBP eCLIP18.65■□□□□ 0.581e-8■■■□□ 17.7
PRKCSH-209ENST00000589838 ZXDCQ2QGD7 858 aaPredicted RBP18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 ABRAXAS1Q6UWZ7 409 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 PATL1Q86TB9 770 aaKnown RBP18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 MSRB3Q8IXL7 192 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 ZNF786Q8N393 782 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 CLHC1Q8NHS4 586 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 POF1BQ8WVV4 589 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 FAM162AQ96A26 154 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 SDCCAG3Q96C92 435 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 CCDC138Q96M89 665 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 PAIP1Q9H074 479 aaKnown RBP18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 SLC25A37Q9NYZ2 338 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 LIMD1Q9UGP4 676 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 FBXO10Q9UK96 956 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 DLGAP4Q9Y2H0 992 aa18.65■□□□□ 0.58
PRKCSH-209ENST00000589838 CXCR6O00574 342 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 SGTAO43765 313 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 PRMT3O60678 531 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 ATG13O75143 517 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 PSIP1O75475 530 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 CATP04040 527 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 RETP07949 1114 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 SYN1P17600 705 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 ITPKAP23677 461 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 PFN3P60673 137 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 IRF8Q02556 426 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 DPY19L1Q2PZI1 675 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 CYP2U1Q7Z449 544 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 TECPR1Q7Z6L1 1165 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 SP7Q8TDD2 431 aaPredicted RBP18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 GLMNQ92990 594 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 TMEM159Q96B96 161 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 PYCR2Q96C36 320 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 FAM120BQ96EK7 910 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 KAT8Q9H7Z6 458 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 DNAJB9Q9UBS3 223 aa18.64■□□□□ 0.57
PRKCSH-209ENST00000589838 PSMD11O00231 422 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 HPRP00739 348 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 ALBP02768 609 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 ETS2P15036 469 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 AMD1P17707 334 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 NELFEP18615 380 aaKnown RBP18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 CALRP27797 417 aaKnown RBP18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 NEK2P51955 445 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 ST8SIA6P61647 398 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 ESRRGP62508 458 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 UBE3AQ05086 875 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 PRSS36Q5K4E3 855 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 GPR180Q86V85 440 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 SPPL3Q8TCT6 385 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 GLYATL1Q969I3 302 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 METTL2AQ96IZ6 378 aaKnown RBP18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 FOPNLQ96NB1 174 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 SH3GL3Q99963 347 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 CPPED1Q9BRF8 314 aaPredicted RBP18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 CCM2Q9BSQ5 444 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 ATG10Q9H0Y0 220 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 PCDHB14Q9Y5E9 798 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 PER2O15055 1255 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 MT-ND1P03886 318 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 GNAO1P09471 354 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 IL1RNP18510 177 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 SDC1P18827 310 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 PRPS1L1P21108 318 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 DGKGP49619 791 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 ALDH3A2P51648 485 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 SRSF11Q05519 484 aaKnown RBP18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 DAG1Q14118 895 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 PGS1Q32NB8 556 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 CYBRD1Q53TN4 286 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 NOXRED1Q6NXP6 359 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 GCNT7Q6ZNI0 430 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 CALHM3Q86XJ0 350 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 KLHDC8AQ8IYD2 350 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 TMBIM1Q969X1 311 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 SLC47A1Q96FL8 570 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 FCRL1Q96LA6 429 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 RDH12Q96NR8 316 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 TSSK3Q96PN8 268 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 MAGIXQ9H6Y5 334 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 RWDD3Q9Y3V2 267 aa18.63■□□□□ 0.57
PRKCSH-209ENST00000589838 NOTCH4Q99466 2003 aa18.62■□□□□ 0.57
PRKCSH-209ENST00000589838 TRIM64CA6NLI5 447 aa18.62■□□□□ 0.57
PRKCSH-209ENST00000589838 OR2AG2A6NM03 316 aa18.62■□□□□ 0.57
PRKCSH-209ENST00000589838 FADS2P1A8MWK0 482 aa18.62■□□□□ 0.57
PRKCSH-209ENST00000589838 WNT9AO14904 365 aa18.62■□□□□ 0.57
PRKCSH-209ENST00000589838 ELFN1P0C7U0 828 aa18.62■□□□□ 0.57
PRKCSH-209ENST00000589838 HSD3B1P14060 373 aa18.62■□□□□ 0.57
PRKCSH-209ENST00000589838 HSD3B2P26439 372 aa18.62■□□□□ 0.57
PRKCSH-209ENST00000589838 HNF4AP41235 474 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms