RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	ZC3H7B	Q9UGR2	993 aa	Known RBP	6.78	□□□□□ -1.32
MARK3-215	ENST00000558787	KCND3	Q9UK17	655 aa		6.78	□□□□□ -1.32
MARK3-215	ENST00000558787	MAN2B2	Q9Y2E5	1009 aa		6.78	□□□□□ -1.32
MARK3-215	ENST00000558787	EFR3B	Q9Y2G0	817 aa		6.78	□□□□□ -1.32
MARK3-215	ENST00000558787	CAPN6	Q9Y6Q1	641 aa		6.78	□□□□□ -1.32
MARK3-215	ENST00000558787	COLEC10	Q9Y6Z7	277 aa		6.78	□□□□□ -1.32
MARK3-215	ENST00000558787	SPTAN1	Q13813	2472 aa	Known RBP	6.77	□□□□□ -1.32
MARK3-215	ENST00000558787	NBPF19	A0A087WUL8	3843 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	MED13	Q9UHV7	2174 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	IGLV3-16	A0A075B6K0	115 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	TRBV5-4	A0A0C4DH59	114 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	CCDC162P	A2VCL2	907 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	ARGFX	A6NJG6	315 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	C21orf140	B9A014	251 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	MKRN2OS	H3BPM6	223 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	HCRTR1	O43613	425 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	RFPL1	O75677	317 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	MT-ND3	P03897	115 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	TPBGL	P0DKB5	382 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	RALB	P11234	206 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	ACRV1	P26436	265 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	CASQ1	P31415	396 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	HADHA	P40939	763 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	CETN2	P41208	172 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	GRIA1	P42261	906 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	LMAN1	P49257	510 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	CCL11	P51671	97 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	PMS2	P54278	862 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	CSE1L	P55060	971 aa	Known RBP	6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	RPS15	P62841	145 aa	Known RBP	6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	SRSF1	Q07955	248 aa	Known RBP eCLIP	6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	PRKAA1	Q13131	559 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	SEMA5A	Q13591	1074 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	LAMB3	Q13751	1172 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	RPS6KA1	Q15418	735 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	UGT8	Q16880	541 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	PTCHD3	Q3KNS1	767 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	CYP27C1	Q4G0S4	372 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	ZNF789	Q5FWF6	425 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	PLEKHS1	Q5SXH7	462 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	TMTC4	Q5T4D3	741 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	MEI1	Q5TIA1	1274 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	KMT5C	Q86Y97	462 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	TMEM151B	Q8IW70	566 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	SLC35F6	Q8N357	371 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	TEX19	Q8NA77	164 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	ACVR1C	Q8NER5	493 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	OR52E1	Q8NGJ3	308 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	OR52K1	Q8NGK4	314 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	OR5AR1	Q8NGP9	310 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	ZFPM2	Q8WW38	1151 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	CLIP3	Q96DZ5	547 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	CDKN2AIPNL	Q96HQ2	116 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	TRAPPC9	Q96Q05	1148 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	CD180	Q99467	661 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	NAPG	Q99747	312 aa	Predicted RBP	6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	KRTAP9-9	Q9BYP9	154 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	KRTAP9-4	Q9BYQ2	154 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	FAM60A	Q9NP50	221 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	C1GALT1	Q9NS00	363 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	NLE1	Q9NVX2	485 aa	Predicted RBP	6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	SPHK1	Q9NYA1	384 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	SLC2A6	Q9UGQ3	507 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	CIDEB	Q9UHD4	219 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	ANAPC2	Q9UJX6	822 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	POMT2	Q9UKY4	750 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	PLAGL1	Q9UM63	463 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	FARSA	Q9Y285	508 aa	Known RBP	6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	PCDHGA6	Q9Y5G7	932 aa		6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	TNRC6A	Q8NDV7	1962 aa	Known RBP	6.77	□□□□□ -1.33
MARK3-215	ENST00000558787	C17orf113	A0A1B0GUU1	675 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	TMEM238L	A0A1B0GVL6	79 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787		A6NL46	340 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	TMEM150C	B9EJG8	249 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	IFRD1	O00458	451 aa	Predicted RBP	6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	CES2	O00748	559 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	EIF1AY	O14602	144 aa	Known RBP	6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	OR1I1	O60431	355 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	CAPN1	P07384	714 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	ETS1	P14921	441 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	CYP2A7	P20853	494 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	NDUFS1	P28331	727 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	ITGA1	P56199	1179 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	FOXL2	P58012	376 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	PDE1B	Q01064	536 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	CACNG1	Q06432	222 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	KLRB1	Q12918	225 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	KLF1	Q13351	362 aa	Predicted RBP	6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	SNX1	Q13596	522 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	BOP1	Q14137	746 aa	Known RBP	6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	ZIC1	Q15915	447 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	GPR33	Q49SQ1	333 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	NADK2	Q4G0N4	442 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	TCTN3	Q6NUS6	607 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	SEZ6L2	Q6UXD5	910 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	SYT10	Q6XYQ8	523 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	UNC5A	Q6ZN44	842 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	CDHR3	Q6ZTQ4	885 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	CBLL1	Q75N03	491 aa		6.76	□□□□□ -1.33
MARK3-215	ENST00000558787	LDB1	Q86U70	411 aa	Predicted RBP	6.76	□□□□□ -1.33

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