RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 RIPPLY3P57055 190 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 POLR2FP61218 127 aaKnown RBP5.9□□□□□ -1.46
ZEB1-211ENST00000558440 RPL7AP62424 266 aaKnown RBP5.9□□□□□ -1.46
ZEB1-211ENST00000558440 RPS15P62841 145 aaKnown RBP5.9□□□□□ -1.46
ZEB1-211ENST00000558440 CHAF1BQ13112 559 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 MRPL49Q13405 166 aaKnown RBP5.9□□□□□ -1.46
ZEB1-211ENST00000558440 PTPRRQ15256 657 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 CHRNA6Q15825 494 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 CAMK4Q16566 473 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 UGT8Q16880 541 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 ERMARDQ5T6L9 678 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 FNDC7Q5VTL7 733 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 RFLNAQ6ZTI6 216 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 TICAM1Q8IUC6 712 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 SRRM1Q8IYB3 904 aaKnown RBP5.9□□□□□ -1.46
ZEB1-211ENST00000558440 NPWQ8N729 165 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 SCAMP4Q969E2 229 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 MIEF2Q96C03 454 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 MOCOSQ96EN8 888 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 COX14Q96I36 57 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 C5orf34Q96MH7 638 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 PCDHB18PQ96TA0 734 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 AGAP2Q99490 1192 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 RIOK2Q9BVS4 552 aaKnown RBP5.9□□□□□ -1.46
ZEB1-211ENST00000558440 GPR87Q9BY21 358 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 PITHD1Q9GZP4 211 aaPredicted RBP5.9□□□□□ -1.46
ZEB1-211ENST00000558440 BRD8Q9H0E9 1235 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 GANQ9H2C0 597 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 OSGEPL1Q9H4B0 414 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 ZNF768Q9H5H4 540 aaKnown RBP5.9□□□□□ -1.46
ZEB1-211ENST00000558440 RMI1Q9H9A7 625 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 UCK1Q9HA47 277 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 PDE7BQ9NP56 450 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 NLRC4Q9NPP4 1024 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 INTS7Q9NVH2 962 aaKnown RBP5.9□□□□□ -1.46
ZEB1-211ENST00000558440 PARPBPQ9NWS1 579 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 LUZP4Q9P127 313 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 PCSK1NQ9UHG2 260 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 DNPEPQ9ULA0 475 aa5.9□□□□□ -1.46
ZEB1-211ENST00000558440 PCDHGA9Q9Y5G4 932 aaKnown RBP5.9□□□□□ -1.46
ZEB1-211ENST00000558440 CROCCQ5TZA2 2017 aa5.9□□□□□ -1.47
ZEB1-211ENST00000558440 NAV3Q8IVL0 2385 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 A0A0J9YYE9 177 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 A0A0U1RQS6 177 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 TCRBV5S1A1TA0A578 114 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 GOLGA6L3A6NEY3 463 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 GRID2O43424 1007 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 PRPSAP2O60256 369 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 DNAJC6O75061 913 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 RNF8O76064 485 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 MTA2O94776 668 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 LDLRP01130 860 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 TRBC1P01850 177 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 TPM2P07951 284 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 VSIG10L2P0DP72 767 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 EEF1GP26641 437 aaKnown RBP5.89□□□□□ -1.47
ZEB1-211ENST00000558440 PTPN4P29074 926 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 MMP13P45452 471 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 CAPZBP47756 277 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 LEPRP48357 1165 aaKnown RBP5.89□□□□□ -1.47
ZEB1-211ENST00000558440 ZNF135P52742 658 aaPredicted RBP5.89□□□□□ -1.47
ZEB1-211ENST00000558440 CDH6P55285 790 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 MAXP61244 160 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 RPS18P62269 152 aaKnown RBP5.89□□□□□ -1.47
ZEB1-211ENST00000558440 UBE2IP63279 158 aaKnown RBP5.89□□□□□ -1.47
ZEB1-211ENST00000558440 PDE1BQ01064 536 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 ADCY2Q08462 1091 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 ITKQ08881 620 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 TUBB3Q13509 450 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 CA9Q16790 459 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 PRR30Q53SZ7 412 aaPredicted RBP5.89□□□□□ -1.47
ZEB1-211ENST00000558440 MARC1Q5VT66 337 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 CACHD1Q5VU97 1274 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 PAPD7Q5XG87 772 aaKnown RBP5.89□□□□□ -1.47
ZEB1-211ENST00000558440 IRGCQ6NXR0 463 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 JMJD6Q6NYC1 403 aaPredicted RBP5.89□□□□□ -1.47
ZEB1-211ENST00000558440 FAM111BQ6SJ93 734 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 FAM92BQ6ZTR7 304 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 TMEM26Q6ZUK4 368 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 MON1BQ7L1V2 547 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 PRSS42Q7Z5A4 293 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 SYVN1Q86TM6 617 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 HPS6Q86YV9 775 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 RHOT1Q8IXI2 618 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 PGBD5Q8N414 524 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 ATPAF2Q8N5M1 289 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 PIH1D2Q8WWB5 315 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 PNPLA2Q96AD5 504 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 ZDHHC12Q96GR4 267 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 MGME1Q9BQP7 344 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 SNRNP25Q9BV90 132 aaKnown RBP5.89□□□□□ -1.47
ZEB1-211ENST00000558440 TRIM8Q9BZR9 551 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 ING2Q9H160 280 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 ZWILCHQ9H900 591 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 MLXIPLQ9NP71 852 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 FAM207AQ9NSI2 230 aaPredicted RBP5.89□□□□□ -1.47
ZEB1-211ENST00000558440 KLC4Q9NSK0 619 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 OXSMQ9NWU1 459 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 OGFRQ9NZT2 677 aa5.89□□□□□ -1.47
ZEB1-211ENST00000558440 ERRFI1Q9UJM3 462 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms