RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 SRFP11831 508 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 MYCLP1P12525 358 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 JUPP14923 745 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 GABRG2P18507 467 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 CD22P20273 847 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 CAPN3P20807 821 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 PRPH2P23942 346 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 CASP2P42575 452 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 NUDT2P50583 147 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 STX1BP61266 288 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 TBL3Q12788 808 aaKnown RBP9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 SGCGQ13326 291 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 NAE1Q13564 534 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 ZNF423Q2M1K9 1284 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 PLA2G4EQ3MJ16 856 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 PIGGQ5H8A4 983 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 LIPJQ5W064 366 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 TBC1D3GQ6DHY5 549 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 CAPRIN2Q6IMN6 1127 aaKnown RBP9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 TBC1D3CQ6IPX1 549 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 DOK6Q6PKX4 331 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 BLOC1S3Q6QNY0 202 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 UNC5DQ6UXZ4 953 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 RETREG3Q86VR2 466 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 AMZ2Q86W34 360 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 RGL4Q8IZJ4 473 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 TBC1D3Q8IZP1 549 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 FBXW8Q8N3Y1 598 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 ENDOVQ8N8Q3 282 aaKnown RBP9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 OR9A1PQ8NGU1 263 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 WDR20Q8TBZ3 569 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 GANCQ8TET4 914 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 PPP3R2Q96LZ3 170 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 APOOQ9BUR5 198 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 SLC25A23Q9BV35 468 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 SGPP1Q9BX95 441 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 ACTL8Q9H568 366 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 WDR26Q9H7D7 661 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 ACTR8Q9H981 624 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 PHPT1Q9NRX4 125 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 ASIC5Q9NY37 505 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 ZIM2Q9NZV7 527 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 NKX1-2Q9UD57 310 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 KLQ9UEF7 1012 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 EBF1Q9UH73 591 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 ZNHIT2Q9UHR6 403 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 ZNF490Q9ULM2 529 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 PCDHGA7Q9Y5G6 932 aa9.2□□□□□ -0.94
HNRNPC-223ENST00000556142 ASPDHA6ND91 283 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 RGS14O43566 566 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 ULK1O75385 1050 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 RSL1D1O76021 490 aaKnown RBP9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 ERGP11308 486 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 CD72P21854 359 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 CCND1P24385 295 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 ACSL1P33121 698 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 NME5P56597 212 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 ACTR3P61158 418 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 UFM1P61960 85 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 CHIT1Q13231 466 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 TDGQ13569 410 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 PUM1Q14671 1186 aaKnown RBP eCLIP9.19□□□□□ -0.946e-12■□□□□ 10.8
HNRNPC-223ENST00000556142 TLR1Q15399 786 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 ZRSR2Q15696 482 aaKnown RBP9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 KIF19Q2TAC6 998 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 AP5B1Q2VPB7 878 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 TRMT5Q32P41 509 aaKnown RBP9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 ATP6AP1LQ52LC2 224 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 COQ5Q5HYK3 327 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 RIPOR1Q6ZS17 1223 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 PDZD3Q86UT5 571 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 TRIM69Q86WT6 500 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 MYLK4Q86YV6 388 aaPredicted RBP9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 KIAA2013Q8IYS2 634 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 FNDC5Q8NAU1 212 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 PPFIBP2Q8ND30 876 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 PROKR1Q8TCW9 393 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 WDR34Q96EX3 536 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 SLC45A3Q96JT2 553 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 FCRL1Q96LA6 429 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 MAGEB10Q96LZ2 347 aaPredicted RBP9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 CNTNAP3BQ96NU0 1288 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 HBEGFQ99075 208 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 GPATCH1Q9BRR8 931 aaKnown RBP9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 MENTQ9BUN1 341 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 CNTNAP3Q9BZ76 1288 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 ACPTQ9BZG2 426 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 RMI1Q9H9A7 625 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 FZD3Q9NPG1 666 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 ITM2CQ9NQX7 267 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 GPRC5BQ9NZH0 403 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 CIDEBQ9UHD4 219 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 NCKAP1Q9Y2A7 1128 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 NDUFAF1Q9Y375 327 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 FRYLO94915 3013 aa9.19□□□□□ -0.94
HNRNPC-223ENST00000556142 KLHL33A6NCF5 533 aa9.18□□□□□ -0.94
HNRNPC-223ENST00000556142 PABPN1LA6NDY0 278 aaKnown RBP9.18□□□□□ -0.94
HNRNPC-223ENST00000556142 BBIP1A8MTZ0 92 aa9.18□□□□□ -0.94
HNRNPC-223ENST00000556142 E7ENX8 843 aa9.18□□□□□ -0.94
HNRNPC-223ENST00000556142 E7EQ34 232 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms