RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 TMEM27Q9HBJ8 222 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 FARSBQ9NSD9 589 aaKnown RBP12.53□□□□□ -0.4
PTCH1-212ENST00000546744 NUDT15Q9NV35 164 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 HCN4Q9Y3Q4 1203 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 NR2E3Q9Y5X4 410 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 AP1M2Q9Y6Q5 423 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 RREB1Q92766 1687 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 MYH13Q9UKX3 1938 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 IGLV3-22A0A075B6J6 115 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 SH3D21A4FU49 640 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 GATBO75879 557 aaKnown RBP12.52□□□□□ -0.4
PTCH1-212ENST00000546744 CXCR4P61073 352 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 TSPAN5P62079 268 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 RPA4Q13156 261 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 SETMARQ53H47 684 aaPredicted RBP12.52□□□□□ -0.4
PTCH1-212ENST00000546744 AGAP6Q5VW22 663 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 WSCD1Q658N2 575 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 FAM180AQ6UWF9 173 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 MARCH9Q86YJ5 346 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 CRYBG2Q8N1P7 616 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 OR4K2Q8NGD2 314 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 ZNF675Q8TD23 568 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 TBATAQ96M53 351 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 ZFP3Q96NJ6 502 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 AGAP4Q96P64 663 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 KLHL5Q96PQ7 755 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 DUSP26Q9BV47 211 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 TBC1D17Q9HA65 648 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 DNMT3LQ9UJW3 386 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 MGAT4BQ9UQ53 548 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 CPQQ9Y646 472 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 IRS2Q9Y4H2 1338 aa12.52□□□□□ -0.4
PTCH1-212ENST00000546744 SOBPA7XYQ1 873 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 CLIC1O00299 241 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 SDHDO14521 159 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 CDRT1O95170 752 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 RGS8P57771 180 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-212ENST00000546744 IL10RBQ08334 325 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 CLCA4Q14CN2 919 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 TSPAN33Q86UF1 283 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 IQCF2Q8IXL9 164 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 AIF1LQ9BQI0 150 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 SLC35C2Q9NQQ7 365 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 PCDHB7Q9Y5E2 793 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 TNRC6CQ9HCJ0 1690 aaKnown RBP12.52□□□□□ -0.41
PTCH1-212ENST00000546744 TUBGCP6Q96RT7 1819 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 SLC1A7O00341 560 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 TSPAN3O60637 253 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 RAB36O95755 333 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 AQP1P29972 269 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 ARL2P36404 184 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 GBX2P52951 348 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-212ENST00000546744 PRKAG1P54619 331 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 SLC25A11Q02978 314 aaKnown RBP12.52□□□□□ -0.41
PTCH1-212ENST00000546744 DSG2Q14126 1118 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF630Q2M218 657 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-212ENST00000546744 AGAP7PQ5VUJ5 663 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 FAM122CQ6P4D5 195 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 NOXA1Q86UR1 476 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 IGFN1Q86VF2 1251 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 RPLP0P6Q8NHW5 317 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 PIWIL1Q96J94 861 aaKnown RBP12.52□□□□□ -0.41
PTCH1-212ENST00000546744 CCDC3Q9BQI4 270 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 AIFM2Q9BRQ8 373 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 COMMD4Q9H0A8 199 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 SGK2Q9HBY8 427 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 CUEDC1Q9NWM3 386 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF639Q9UID6 485 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 ENPP5Q9UJA9 477 aa12.52□□□□□ -0.41
PTCH1-212ENST00000546744 LRRN3E7EW58 273 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 WNT10BO00744 389 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 PAGE1O75459 146 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 PRAMEF12O95522 483 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 LAMP2P13473 410 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 PRKACAP17612 351 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 GRM2Q14416 872 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 RHEBQ15382 184 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 CELF3Q5SZQ8 465 aaKnown RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 ABHD15Q6UXT9 468 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 AGMOQ6ZNB7 445 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 OR7G1Q8NGA0 311 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 MAELQ96JY0 434 aaKnown RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 PPA2Q9H2U2 334 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 LRRN3Q9H3W5 708 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 TCF7L1Q9HCS4 588 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 AJAP1Q9UKB5 411 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 CDH10Q9Y6N8 788 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF780BQ9Y6R6 833 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 MYH8P13535 1937 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 NRCAMQ92823 1304 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 HMX3A6NHT5 357 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF432O94892 652 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 SNAP29O95721 258 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 IVDP26440 423 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 RYKP34925 604 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 EIF2DP41214 584 aaKnown RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 RPS5P46782 204 aaKnown RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 RPIAP49247 311 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 EIF4HQ15056 248 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms