RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 SLC22A3O75751 556 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 DDHD2O94830 711 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 TGDSO95455 350 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 ZFYP08048 801 aaPredicted RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 FAM58BPP0C7Q3 252 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 HAPLN1P10915 354 aaPredicted RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 GNAZP19086 355 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 CDC25CP30307 473 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 MNDAP41218 407 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 TNNT3P45378 269 aaPredicted RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 KCNJ1P48048 391 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 HOXA1P49639 335 aaPredicted RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 GMPSP49915 693 aaPredicted RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 ASCL1P50553 236 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 RBP5P82980 135 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 PRKCZQ05513 592 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 TAF10Q12962 218 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 DMP1Q13316 513 aaPredicted RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 LACTB2Q53H82 288 aaPredicted RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 TECRLQ5HYJ1 363 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 ELFN2Q5R3F8 820 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 C6orf136Q5SQH8 315 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 C11orf63Q6NUN7 778 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 ABI3BPQ7Z7G0 1075 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 ZNF554Q86TJ5 538 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 NFE4Q86UQ8 179 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 CDK20Q8IZL9 346 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 APCDD1Q8J025 514 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 ATL1Q8WXF7 558 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 ST6GALNAC6Q969X2 333 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 SLC47A1Q96FL8 570 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 SENP5Q96HI0 755 aaPredicted RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 FAM20AQ96MK3 541 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 SPATA33Q96N06 139 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 JAKMIP1Q96N16 626 aaKnown RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 RHNO1Q9BSD3 238 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 GTPBP2Q9BX10 602 aaKnown RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 ALDH8A1Q9H2A2 487 aaPredicted RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 BICC1Q9H694 974 aaKnown RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 CDH20Q9HBT6 801 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 ZBTB20Q9HC78 741 aaPredicted RBP3.22□□□□□ -1.89
VPS41-207ENST00000439468 NME7Q9Y5B8 376 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 NESP48681 1621 aa3.22□□□□□ -1.89
VPS41-207ENST00000439468 IGLV9-49A0A0B4J1Y8 123 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 CCER2I3L3R5 266 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 CCL24O00175 119 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 NGFP01138 241 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 FRMD6-AS1P0C7T7 363 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 CA4P22748 312 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 PSMB4P28070 264 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 ALDH1B1P30837 517 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 BMXP51813 675 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 PDX1P52945 283 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 GCNT1Q02742 428 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 GAGE5Q13069 117 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 GAGE6Q13070 117 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 CUL3Q13618 768 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 SQLEQ14534 574 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 MRGPRG-AS1Q2M3A8 158 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 ZNF449Q6P9G9 518 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 PET117Q6UWS5 81 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 TMEM182Q6ZP80 229 aaPredicted RBP3.21□□□□□ -1.9
VPS41-207ENST00000439468 MMD2Q8IY49 270 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 SIX6OS1Q8N1H7 587 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 METTL27Q8N6F8 245 aaPredicted RBP3.21□□□□□ -1.9
VPS41-207ENST00000439468 ZNF611Q8N823 705 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 ZNF383Q8NA42 475 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 KLHDC9Q8NEP7 349 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 DEPDC1BQ8WUY9 529 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 HEXDCQ8WVB3 486 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 MR1Q95460 341 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 ATP6V1E2Q96A05 226 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 FBXO17Q96EF6 278 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 SCRN2Q96FV2 425 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 FAM71F1Q96KD3 344 aaPredicted RBP3.21□□□□□ -1.9
VPS41-207ENST00000439468 FNBP1Q96RU3 617 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 CITED2Q99967 270 aaPredicted RBP3.21□□□□□ -1.9
VPS41-207ENST00000439468 FERMT1Q9BQL6 677 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 LAT2Q9GZY6 243 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 ZWILCHQ9H900 591 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 XAB2Q9HCS7 855 aaKnown RBP3.21□□□□□ -1.9
VPS41-207ENST00000439468 SDR39U1Q9NRG7 319 aaPredicted RBP3.21□□□□□ -1.9
VPS41-207ENST00000439468 GKN1Q9NS71 199 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 STK26Q9P289 416 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 SMARCA2P51531 1590 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 WDR81Q562E7 1941 aa3.21□□□□□ -1.9
VPS41-207ENST00000439468 LOC101059948A0A1B0GTJ6 334 aa3.2□□□□□ -1.9
VPS41-207ENST00000439468 ANKRD61A6NGH8 418 aa3.2□□□□□ -1.9
VPS41-207ENST00000439468 CASTOR2A6NHX0 329 aa3.2□□□□□ -1.9
VPS41-207ENST00000439468 ENO4A6NNW6 628 aa3.2□□□□□ -1.9
VPS41-207ENST00000439468 PRAF2O60831 178 aa3.2□□□□□ -1.9
VPS41-207ENST00000439468 ATP6AP2O75787 350 aa3.2□□□□□ -1.9
VPS41-207ENST00000439468 PLA2G4BP0C869 781 aa3.2□□□□□ -1.9
VPS41-207ENST00000439468 SAGP10523 405 aaPredicted RBP3.2□□□□□ -1.9
VPS41-207ENST00000439468 FGF5P12034 268 aa3.2□□□□□ -1.9
VPS41-207ENST00000439468 ADRA2CP18825 462 aa3.2□□□□□ -1.9
VPS41-207ENST00000439468 MUTP22033 750 aa3.2□□□□□ -1.9
VPS41-207ENST00000439468 ACAT1P24752 427 aaKnown RBP3.2□□□□□ -1.9
VPS41-207ENST00000439468 SLC6A6P31641 620 aa3.2□□□□□ -1.9
VPS41-207ENST00000439468 RASGEF1BQ0VAM2 473 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms