RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 SLC36A4Q6YBV0 504 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ZNF517Q6ZMY9 492 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PLEKHG7Q6ZR37 379 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CMC1Q7Z7K0 106 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 FAM86B1Q8N7N1 296 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 COX18Q8N8Q8 333 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 STOML3Q8TAV4 291 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 HTRA1Q92743 480 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ZNF641Q96N77 438 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PCDHB18PQ96TA0 734 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 SLC6A16Q9GZN6 736 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 NELFAQ9H3P2 528 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ERVK-5Q9HDB9 667 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 TNFRSF10DQ9UBN6 386 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 VPS29Q9UBQ0 182 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 TMEM14AQ9Y6G1 99 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 A0A1W2PP18 115 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 SMCO3A2RU48 225 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PCDHGA12O60330 932 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 AOC2O75106 756 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PPM1BO75688 479 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 GNAO1P09471 354 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ARF4P18085 180 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 SLC6A6P31641 620 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ADCYAP1R1P41586 468 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 MARCKSL1P49006 195 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CLCN7P51798 805 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CYP4F2P78329 520 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 SF1Q15637 639 aaKnown RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 QPCTQ16769 361 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 TPRG1LQ5T0D9 272 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 FAAH2Q6GMR7 532 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 SERPINA9Q86WD7 417 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PAQR7Q86WK9 346 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ZNF440Q8IYI8 595 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CFAP206Q8IYR0 622 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 TMEM145Q8NBT3 493 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 LRRN4CLQ8ND94 238 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 FAM46DQ8NEK8 389 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 JOSD2Q8TAC2 188 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 HASPINQ8TF76 798 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 LRTOMTQ8WZ04 291 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 TMEM80Q96HE8 168 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 HS6ST2Q96MM7 605 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 GPR20Q99678 358 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 BHLHE41Q9C0J9 482 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 OR2B2Q9GZK3 357 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 XKR8Q9H6D3 395 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 MS4A12Q9NXJ0 267 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CYTH4Q9UIA0 394 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CNOT6Q9ULM6 557 aaKnown RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 H0YGN5 161 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 TFECO14948 347 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PIP5K1BO14986 540 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 VEGFDO43915 354 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 SLITRK5O94991 958 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 C1RP00736 705 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 UNGP13051 313 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 BTN3A2P78410 334 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 DHCR24Q15392 516 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 SLC36A3Q495N2 470 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 FAM76BQ5HYJ3 339 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 COLEC12Q5KU26 742 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 IRF2BP1Q8IU81 584 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ZDHHC14Q8IZN3 488 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 METTL25Q8N6Q8 603 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 NAT8LQ8N9F0 302 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CHST4Q8NCG5 386 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 GRIN3AQ8TCU5 1115 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 GNPDA2Q8TDQ7 276 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 STON2Q8WXE9 905 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 SMPDL3AQ92484 453 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 UPF1Q92900 1129 aaKnown RBP eCLIP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 LRRC58Q96CX6 371 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CDCA5Q96FF9 252 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 SLC30A2Q9BRI3 323 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 DCSTAMPQ9H295 470 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 WDR55Q9H6Y2 383 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 COQ10BQ9H8M1 238 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 RAB9BQ9NP90 201 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 NKIRAS2Q9NYR9 191 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 FAM198AQ9UFP1 575 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CPA4Q9UI42 421 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CENPBD1B2RD01 187 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 M0R129 80 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 DUSP11O75319 330 aaKnown RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ZMPSTE24O75844 475 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 OAS1P00973 400 aaKnown RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 MT-ND5P03915 603 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ZBTB48P10074 688 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 KLRK1P26718 216 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CCKBRP32239 447 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CASRP41180 1078 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 FASTKD3Q14CZ7 662 aaKnown RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ASTE1Q2TB18 679 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ATAT1Q5SQI0 421 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ZNF433Q8N7K0 673 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 AKT1S1Q96B36 256 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 S100A16Q96FQ6 103 aaKnown RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 SMAD5Q99717 465 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms