RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 COX10Q12887 443 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 SLAMF1Q13291 335 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 DGCR6Q14129 220 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 FASTKQ14296 549 aaKnown RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 PRPSAP1Q14558 356 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 STARD3Q14849 445 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 ZMYND11Q15326 602 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 SMAD1Q15797 465 aaKnown RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 ST3GAL2Q16842 350 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 CYP51A1Q16850 503 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 CTU2Q2VPK5 515 aaKnown RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 GPAT3Q53EU6 434 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 AGKQ53H12 422 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 TPRG1LQ5T0D9 272 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 MPP7Q5T2T1 576 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 SLC8B1Q6J4K2 584 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 FAM45BPQ6NSW5 357 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 C8orf82Q6P1X6 216 aaPredicted RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 TMEM65Q6PI78 240 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 CCDC149Q6ZUS6 474 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 ZNF767PQ75MW2 155 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 EFL1Q7Z2Z2 1120 aaKnown RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 CDH24Q86UP0 819 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 FAM35AQ86V20 835 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 RAB43Q86YS6 212 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 WDTC1Q8N5D0 677 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 KCTD6Q8NC69 237 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 OR7D4Q8NG98 312 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 FAM45AQ8TCE6 357 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 PPP1R13LQ8WUF5 828 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 RORBQ92753 470 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 RPL3LQ92901 407 aaKnown RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 OTUB2Q96DC9 234 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 YIPF6Q96EC8 236 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 MSANTD3Q96H12 275 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 ELMO2Q96JJ3 720 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 RPL10LQ96L21 214 aaKnown RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 SENP8Q96LD8 212 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 UBXN10Q96LJ8 280 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 NEDD4LQ96PU5 975 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 CDCA3Q99618 268 aaPredicted RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 OSMRQ99650 979 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 PRRG3Q9BZD7 231 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 NUAK2Q9H093 628 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 CWH43Q9H720 699 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 ANKHQ9HCJ1 492 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 LTB4R2Q9NPC1 389 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 PRDM8Q9NQV8 689 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 ENTPD7Q9NQZ7 604 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 OXSMQ9NWU1 459 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 CPNE7Q9UBL6 633 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 VTI1BQ9UEU0 232 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 ZNF639Q9UID6 485 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 GMEB2Q9UKD1 530 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 FZD10Q9ULW2 581 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 USP18Q9UMW8 372 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 SNX6Q9UNH7 406 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 BTBD3Q9Y2F9 522 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 GRIP1Q9Y3R0 1128 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 HES2Q9Y543 173 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 PCDHGB6Q9Y5F9 930 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 KCNE2Q9Y6J6 123 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 DENND4CQ5VZ89 1909 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 MTCL1Q9Y4B5 1905 aaKnown RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 TMEM233B4DJY2 109 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 SLCO1B7G3V0H7 640 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 LINC01387J3KSC0 135 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 NME4O00746 187 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 INPP4BO15327 924 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 KCNN4O15554 427 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 B4GALT5O43286 388 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 NRP2O60462 931 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 SOAT2O75908 522 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 PAHP00439 452 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 LDLRP01130 860 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 IFNA16P05015 189 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 APOA4P06727 396 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 SNRPB2P08579 225 aaKnown RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 HNRNPA1P09651 372 aaKnown RBP eCLIP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 ZDHHC11BP0C7U3 371 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 CD19P15391 556 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 ITGA2P17301 1181 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 MSH3P20585 1137 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 ERP29P30040 261 aaKnown RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 THPOP40225 353 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 MAGEA3P43357 314 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 ATP5OP48047 213 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 ARSFP54793 590 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 NAGLUP54802 743 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 TPD52P55327 224 aaPredicted RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 SNRPD2P62316 118 aaKnown RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 CD83Q01151 205 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 YWHAHQ04917 246 aaPredicted RBP3.9□□□□□ -1.79
CNGA1-201ENST00000358519 PRKCDQ05655 676 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 TRAF3Q13114 568 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 PRKAA1Q13131 559 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 SEMA3BQ13214 749 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 SEMA5AQ13591 1074 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 EFR3AQ14156 821 aa3.9□□□□□ -1.79
CNGA1-201ENST00000358519 GALEQ14376 348 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms